Ktedonosporobacter rubrisoli: EPA93_04610
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Entry
EPA93_04610 CDS
T05969
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kbs
Ktedonosporobacter rubrisoli
Pathway
kbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EPA93_04610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kbs03021
]
EPA93_04610
03019 Messenger RNA biogenesis [BR:
kbs03019
]
EPA93_04610
Transcription machinery [BR:
kbs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EPA93_04610
Messenger RNA biogenesis [BR:
kbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EPA93_04610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA
NACHT
Mor
AAA_24
ATPase_2
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QBD75317
UniProt:
A0A4P6JJK5
LinkDB
All DBs
Position
1002259..1003527
Genome browser
AA seq
422 aa
AA seq
DB search
MNITELEARTVSELRELARDLELSGYSTLKKQELIFRILQAYTEQQGNMFSAGVLDIVEE
GFGFLRQEHFLPGNKDVYVSQSQIRRFGMRVGDMIFGQVRPPRDNEKFYSLLRVEAINGQ
NPETGKRRPYFDHLTPISPRELLNLETTGSNLSGRLINLIAPIGRGQRGLIVSPPKAGKT
ILLKTIANSITTNYEDVHLMVVLIGERPEEVTDMKQSVKAELVSSTFDEPPEAHIWVAEM
VLERAKRLVESGRDVVVLLDSITRLSRAYNLFVQPSGRTLSGGLDPSALFPPKRFFGAAR
KIEEGGSLTVIATCLVDTGSHMDNVIYEEFKGTGNMELVLNRKLAERRIFPAIDISLSST
RREELLLEEKTLRAVVTMRRMFSALADQPGRNGQEATEALLQRMSRTHNNMEFLATLKAA
LK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatcactgagttagaagcaaggactgtcagcgagttgcgagagctggcccgcgat
ctcgaactctctggttacagcacgctgaagaagcaagagcttattttcagaattttgcag
gcctacaccgagcagcaggggaacatgttcagtgcaggcgtcctggatatagttgaggag
ggatttggcttcctgaggcaggaacatttcttgccaggcaataaagatgtctacgtttca
caatcgcagattcgccgtttcggcatgcgcgtaggcgatatgatctttgggcaggtgcgg
cctccccgcgataacgagaagttctacagcttgttacgcgtcgaagccatcaatgggcag
aaccccgaaacgggcaaacgccgtccatactttgaccatctgacccccatctcgccgcgt
gaacttctcaacctggaaacgacaggctccaacctctccggtcgcctgattaatcttatc
gctcctattggccgaggtcagcgcggcttaatcgtctctcctcctaaggcgggcaagact
attctgttaaaaactatcgcgaactctatcaccacgaactatgaagatgttcatctcatg
gttgtcctgattggcgagcgccccgaggaagtcaccgatatgaaacaatcggtaaaggcc
gagcttgtcagttccaccttcgatgaaccacccgaggcccacatctgggtcgcagagatg
gtcttagagcgcgctaagcgccttgtggaaagcggacgcgatgtggttgtactgctcgat
agcattacacgcctgagccgtgcctacaacctgtttgtgcaaccgagcgggcgtacactc
tcgggcggccttgatccaagtgccttatttccacccaagcgtttctttggcgctgcacgc
aagatcgaagagggcggcagccttacagttatcgctacctgtcttgtcgataccgggagc
cacatggataacgtgatctacgaagagtttaaaggtaccggcaatatggagcttgtcctc
aatcgtaagctggccgagcgccgcattttcccggctatcgatatatctctctccagcaca
cgccgcgaagagctcttgctcgaagagaagaccttgcgcgctgtggtgactatgcgccgg
atgttctcagcgctagccgatcagcctgggcgcaacggtcaggaagctaccgaggccctt
ttacagcgtatgtccagaacccataataacatggagtttcttgctacccttaaagctgca
ctcaaatga
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