Ktedonosporobacter rubrisoli: EPA93_24240
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Entry
EPA93_24240 CDS
T05969
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kbs
Ktedonosporobacter rubrisoli
Pathway
kbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EPA93_24240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kbs03021
]
EPA93_24240
03019 Messenger RNA biogenesis [BR:
kbs03019
]
EPA93_24240
Transcription machinery [BR:
kbs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EPA93_24240
Messenger RNA biogenesis [BR:
kbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EPA93_24240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA_22
AAA_25
Mor
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QBD78923
UniProt:
A0A4P6JUB7
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All DBs
Position
5575805..5577064
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AA seq
419 aa
AA seq
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MPNTTLPTMNNPLEIREHLPSFTPFGDIPVHGQQGPDSPTMNEDMRMAFPGSGILDIAEG
GFGLLRKERYLPGPQDIYISASQIRRFGLRPGDLVAGLIRPPKDHEQYAGMLRVESVNGL
DPEVAKRRPHFDALTPVFPREQFNLETDPANLSGRLINLIAPIGRGQRGLIVAPPKAGKT
VLLKSIANSIAKNHPDAYLLIALIGERPEEVTDLKRSVQAEVISSTFDEPTYAHTYLSEM
VLERAKRLVEGGRDVIILLDSLTRLSRAYNLAVEPSGRSLSGGLDPSALVQPKRFFGAAR
KLDEGGSLTIIATVLVDTGSRMDDVIYEEFKGTGNMELVLQRKLAERRIFPAIDVVLSST
RREELLYDPQTYRAVIVMRRMFAALAEQQGLEAMEALLQQMSKTENNMEFLATLSKRMA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgccaaataccacactaccaacaatgaacaatccactagaaattcgagagcatcttcca
tccttcacaccgtttggagacatcccggtacacgggcagcagggcccagattccccaacg
atgaacgaagatatgcgcatggcctttccgggatcgggaatactcgatatcgccgaaggc
ggatttgggctcctgcgcaaagagcgctacctgccaggaccacaggatatctacatatcc
gcctcacagatccggcgcttcggcttacgccctggcgatctcgtcgcgggcctgattcga
ccgccaaaggatcacgagcagtacgccggaatgctgcgcgtcgagagcgtaaacggcctt
gatcctgaagttgctaaacgtcgtccgcactttgatgccctgacccccgttttcccgcgc
gaacaattcaacctggagaccgatccggccaacctctcgggtcgccttatcaacttgatt
gctcccattggccgtggtcagcgtggcctgatcgttgctccacctaaagccggtaagacg
gttttgctcaagtctattgccaactccatcgccaagaaccaccctgacgcctacttactt
attgccctcattggtgagcgccctgaagaggtgactgacctcaagcgctcagtacaggct
gaagttatcagctctaccttcgatgagccaacctatgcccacacctatctctcagagatg
gtcctggaacgcgccaaacggctggttgagggcgggcgcgacgtgattatcttgctggat
agtctgacgcgcttgagccgggcatataatcttgcagttgagcccagcggccgtagcctc
tctggcggccttgatccaagcgcgctggtccaacccaagcgcttctttggcgctgcgcgt
aagcttgatgagggcggtagcctgacgatcatcgccactgtgctcgtagatacggggagc
cgcatggacgatgttatctatgaggagttcaaggggactggcaatatggagctagtgctc
cagcgcaagctcgccgagcgacgcatcttcccggccatcgacgtggtgctctctagcacg
cgtcgcgaagaactgctctacgatccacaaacctatcgcgcagttatcgttatgcgcagg
atgttcgcggccctggccgagcagcaaggattggaagcaatggaagctctgctccaacag
atgtctaaaaccgagaacaatatggaatttctggccacgctctcaaaacgcatggcctga
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