KEGG   Ktedonosporobacter rubrisoli: EPA93_26140
Entry
EPA93_26140       CDS       T05969                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
kbs  Ktedonosporobacter rubrisoli
Pathway
kbs03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:kbs00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    EPA93_26140 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kbs03019]
    EPA93_26140 (rnc)
   03009 Ribosome biogenesis [BR:kbs03009]
    EPA93_26140 (rnc)
   03036 Chromosome and associated proteins [BR:kbs03036]
    EPA93_26140 (rnc)
Enzymes [BR:kbs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     EPA93_26140 (rnc)
Messenger RNA biogenesis [BR:kbs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EPA93_26140 (rnc)
Ribosome biogenesis [BR:kbs03009]
 Eukaryotic type
  90S particles
   RNase
    EPA93_26140 (rnc)
 Prokaryotic type
  rRNA processing factors
   EPA93_26140 (rnc)
Chromosome and associated proteins [BR:kbs03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     EPA93_26140 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_MRPL44
Other DBs
NCBI-ProteinID: QBD79277
UniProt: A0A4P6JUG2
LinkDB
Position
complement(6018134..6018850)
AA seq 238 aa
MGDMDIDDNLIALEKMLQVTFRDHSLLRRAITHHSCCSTTAVHDSYDTLEFLGDAIISAH
VVEYIYRTFPDATEGEMTALKSEVVSRRVFAKIGQQLGLFPHIRVDVANLRTFNERSRDS
LCADVLEALVGAIHIDQGAEAAREFVARIILPVVLPLSQQTLDANPKGRLQKIVLQRSGC
LPRYKVLEQGGSNNDRVFLVGVFEQDVLLGIGQASSIKEAGRLAAREALELMHEKDGS
NT seq 717 nt   +upstreamnt  +downstreamnt
atgggagacatggatatcgatgataacctcatagcattagaaaaaatgctccaggtcaca
tttcgtgatcattctttattacgtcgggcaatcactcatcactcatgctgctcgacaaca
gcggtgcatgattcctatgatacgctcgaattcctgggtgatgcgattatcagtgcgcat
gtcgtggagtatatttatcgtaccttccccgatgccactgaaggtgagatgacagcactg
aagtccgaggttgtcagtcgtcgtgtctttgctaagattggtcagcagctcgggctcttc
cctcacattcgcgttgatgttgccaatctgcgcacctttaatgagcgctcgcgtgattcc
ctctgcgccgatgtgttggaagctctggttggggctattcatatcgaccagggagcagag
gccgcccgcgagttcgtcgcgcgtattattctgcccgtcgttctgccactcagccagcaa
acgctcgatgccaaccccaaagggcgcttgcagaagatcgtgctgcagcgttcgggttgt
ttgccgcgctataaggtgctggaacaggggggcagcaataacgatcgtgtctttctggta
ggagtatttgaacaagacgttctgttgggaataggccaggcatcaagtattaaggaagcg
ggtcgcctggcggctcgcgaggctctagagcttatgcacgagaaagatgggtcttga

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