KEGG   Ktedonosporobacter rubrisoli: EPA93_32795
Entry
EPA93_32795       CDS       T05969                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
kbs  Ktedonosporobacter rubrisoli
Pathway
kbs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kbs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EPA93_32795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kbs03021]
    EPA93_32795
   03019 Messenger RNA biogenesis [BR:kbs03019]
    EPA93_32795
Transcription machinery [BR:kbs03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     EPA93_32795
Messenger RNA biogenesis [BR:kbs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     EPA93_32795
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB AAA_22 ATPase_2 AAA AAA_24 Mor Spore_III_AA
Other DBs
NCBI-ProteinID: QBD80496
UniProt: A0A4P6JZF8
LinkDB
Position
7543608..7544876
AA seq 422 aa
MNIAELETKTISELRDLARDLELSGYSALKKQDLVFRLLQANTEQQGNIFSAGVLEIVED
GFGFLRQERFLPGNMDVYVSQSQIRRFGLRTGDMVSGQVRPPKDNEKYYGLLRVEAINGV
DPEIAKRRPHFDVLTPIFPREMFNLETSPSNISGRIINLVAPIGRGQRGLIVSPPKAGKT
MLLKSIANSITENYDDTHLMIALIGERPEEVTDMKRSVKAEVISSTFDEPTEAHTRVAEM
VLERAKRLVEGGRDVVVLLDSITRLSRAYNLAVQPSGRTLSGGLDPSALFPPKRFFGAAR
KIEEGGSLTIIATALVDTGSRMDDVIYEEFKGTGNMELVLNRKLAERRVFPAIDISLSST
RREELLLDDKTLRAVVVMRRMFSTLADQPGRSGLEAMEALLQSMSKTSNNMEFLATLNKN
IL
NT seq 1269 nt   +upstreamnt  +downstreamnt
gtgaatatagctgagttagaaactaaaaccatcagcgagttacgcgacctggctcgcgat
ctcgaactctccggctacagtgccctcaaaaagcaagacctcgttttccgcctccttcag
gccaataccgaacagcaaggaaatatctttagtgctggtgtgttggagatagtggaggac
ggatttggctttttgcgtcaggagcgcttcttgccgggtaacatggacgtctatgtctcc
cagtcacagatccgccgctttggtctgcgcaccggagatatggtttctgggcaggttcgc
ccgccaaaggataatgagaaatactacggtctgctgcgtgtcgaagcgatcaatggagta
gatccggagattgccaagcgtcgcccccactttgatgtcctgacaccgattttccctcgt
gagatgtttaacctggagaccagtccctcgaatatctccgggcgcatcattaatctggtg
gctcctatcggacgcgggcagcgcggtctcatcgtttctccccctaaagctggcaaaaca
atgctcctcaagtccattgccaattcgatcactgagaactatgatgatacgcatctgatg
attgctctcattggtgagcgacccgaagaagtcactgatatgaagcgttctgtgaaggct
gaagtcatcagttcaacctttgatgagccgaccgaggcccatacgcgcgtggccgagatg
gtcctggagcgtgccaagcgccttgtcgaaggtggacgcgatgttgtagtgctccttgat
agtattactcgcctgagccgagcttataacctggcagtccagcccagtgggcgtacgctc
tcaggtggtcttgatcccagtgccctctttccgcctaaacgcttctttggtgccgcgcgt
aagattgaggaaggaggcagcctgacaatcattgccactgcccttgtcgataccggtagc
cgtatggatgatgtgatctacgaagagttcaaaggcaccggcaatatggaactcgtcctg
aaccgcaaacttgccgagcgccgtgtcttccccgccatcgacatttccctctccagtacc
cgccgcgaagaactactccttgacgataaaacgctacgtgcagtcgttgtcatgcgccgt
atgttctcgacgctggccgaccagcccggacggagtggtttggaggcgatggaggctcta
ttgcagagtatgtctaagactagcaataatatggagtttcttgccaccctcaataaaaac
attctgtga

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