Ktedonosporobacter rubrisoli: EPA93_41685
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Entry
EPA93_41685 CDS
T05969
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kbs
Ktedonosporobacter rubrisoli
Brite
KEGG Orthology (KO) [BR:
kbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kbs03032
]
EPA93_41685 (topA)
03400 DNA repair and recombination proteins [BR:
kbs03400
]
EPA93_41685 (topA)
Enzymes [BR:
kbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EPA93_41685 (topA)
DNA replication proteins [BR:
kbs03032
]
Prokaryotic type
DNA Topoisomerases
EPA93_41685 (topA)
DNA repair and recombination proteins [BR:
kbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EPA93_41685 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
Zn_ribbon_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QBD82148
UniProt:
A0A4P6K1U3
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Position
9710551..9712992
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AA seq
813 aa
AA seq
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MAKKLVIVESPAKAKTIEKFLGRDFVVLASMGHIIDLPKKGLGVNTRKNFVPQYEVIEKK
DRLIDELKKASLRADEVYLAPDPDREGEFIAWSLKNILGLQNPHRAVFHEITKRAVQEAI
KKPREIDEDLFNAQQARRVLDRLVGYKISPLLWRRIQSGTSAGRVQSVALRLICDREAEI
RAFVPEEYWSITATLSKQKQKERFEATLITRLKDMAMLNEEANEGEEQNGAEGQNTAGAK
KEKGRIKVGSKEEADAILADLQGATYSVLKYEEREQRRQPYLPYTTSTMQQDASVRLYFK
PKKTMSLAQQLYEGIELGQRGHQGLITYMRTDSTRISDEAQAAVKTYIAGEHGQNYVGPG
RVGKAKATTQDAHEAIRPTDVNLTPQVVKSYLTPDQFKLYNLIWRRFVASFMAAAIFDTV
RVDIVARQYVFRATGSNLKFPGFYAVWPREEDEKILPVMQVKEELDFHGLKPEQHFTQPP
PRFTEASLIKELEEQGIGRPSTYVPIISTIQDRGYVDQEQRRFLPTWLGETVNDVMNKHF
PEIVDTRFTAEMERKLDEVEEGRYSWTEFLHSFYGDFKESMKKAEAEMDRVQKPLEELDE
VCPECGRNLVIRTGRFGRFISCSGFPECSYRRSFVNKTGALCPLCNGDLVERKTRQKKRI
FYGCANYPTCNFAIWERPVPDLCPNCGGLMVVPKAGQAPVCYAEYVAGQRDAEEKPVQEN
VKKTTRTSRKKASTTESTAKAAKPSRRRTTAKKQEEADTPAEATNGTAKRATTRSSATRT
RKSASSTGKATTRSRSTASKESSSGKTRTRAAK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaacttgtaatcgtagaatcacccgccaaagccaaaacgattgagaaattt
cttggtcgcgattttgttgtcttggcttcaatgggtcatatcatagatctgcctaaaaaa
ggcctgggtgtaaatacgcggaagaattttgtgcctcagtatgaggtaattgagaagaaa
gacagattaatagatgagttgaagaaggcttccttgcgcgccgatgaagtatacctggcc
cctgaccccgaccgtgaaggcgagttcattgcctggtccttgaagaatatcttaggatta
cagaacccacaccgtgcagttttccatgaaattacaaagcgagcggtgcaggaggcgatt
aaaaagccgcgcgaaattgatgaggacctctttaatgctcagcaagcccgtcgcgttctt
gatcggctggtgggctataagattagtccgttgctctggcgccggattcaatcaggcaca
agcgctggacgtgtgcagtcggtagctctgcgcctgatctgtgatcgcgaggctgagatc
cgggcttttgtgccggaggaatactggagtattacggcaactctgagtaagcagaagcaa
aaagagcgctttgaggctacgttaattacgcgtctcaaagatatggcgatgctgaatgag
gaagctaacgagggcgaagagcagaatggcgccgaggggcaaaatacggccggagcgaaa
aaagagaaggggcgaatcaaggttggttctaaggaagaggcagatgctatccttgccgat
ctacaaggggctacctatagtgtgctgaagtatgaagaacgtgagcagcggcggcagccg
tatttgccttatacaaccagtacaatgcagcaggatgcctcagttcgcctctactttaag
ccaaagaagactatgagcctggcgcagcagctctacgagggcatcgaattaggtcagcgt
ggccatcaaggcctcattacctatatgcgtaccgattcgacgcgtatctcagatgaggcg
caggcggcggtgaaaacgtatattgccggcgaacatggtcagaactatgttgggcccggt
cgtgtgggcaaggctaaagccacaacgcaggatgcgcacgaagcaattcgtccgaccgat
gtgaacttgactcctcaagtggtaaagtcttatctgacgcctgatcagtttaagctctac
aacttaatctggaggcgctttgtcgcaagttttatggcggcggcgatttttgatactgtg
cgcgtagatattgtggccaggcaatatgttttccgtgctacaggttcaaatttgaaattt
cctggcttctatgcggtctggccaagggaagaggatgagaaaattttaccggtcatgcag
gtaaaggaagagctggattttcacggcttgaagccggagcagcactttacgcagccccca
ccgcgctttactgaggccagcctgatcaaagagctggaagagcaggggatcggtcgtcct
agtacttatgtgcctatcatcagtactatccaggatcgtggatatgtcgatcaggaacag
cggcgcttcctgccaacctggttgggcgagacagtcaatgacgtgatgaataagcatttt
cctgagattgtcgatacgcgctttactgcagagatggagcgcaagttggatgaggtagag
gaagggcgctattcgtggactgagttcctacatagcttttacggagacttcaaggagtcc
atgaagaaggcggaagccgagatggaccgggtgcagaagcctctggaggaacttgacgag
gtatgcccggaatgcgggcgcaatctggtaattcgcacgggacgctttggccgctttatc
tcctgctctggttttccggaatgcagctatcgtcgctcttttgtcaataagacaggagcg
ctgtgcccgctatgtaatggggatcttgtggagcgcaagaccaggcaaaagaagcgcatc
ttctatggctgcgcaaactatcctacctgcaactttgcgatctgggagcgccctgtccct
gacctgtgtccaaattgtggtggccttatggttgttcctaaagcgggccaggctcctgtc
tgctatgcagaatacgttgccggacagcgcgatgctgaagaaaagcctgtgcaagaaaat
gtgaagaaaacgacgcggaccagtcgcaagaaagcttctacaacagagagtacggcaaag
gccgcaaagccgagccggcggcgcacaacagcaaagaagcaggaggaagctgacacgcct
gccgaggccacgaatggaactgctaagcgtgcaaccacgcgttccagcgccacgcgcacg
cgtaaaagcgcctcctctactggcaaggcgacaacaaggagcagaagtactgcttctaaa
gaaagttcatccggcaaaaccagaaccagggctgctaagtaa
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