Candidatus Kinetoplastidibacterium blastocrithidiae TCC012E: BCUE_0041
Help
Entry
BCUE_0041 CDS
T02463
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kbt
Candidatus Kinetoplastidibacterium blastocrithidiae TCC012E
Brite
KEGG Orthology (KO) [BR:
kbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kbt03016
]
BCUE_0041
Enzymes [BR:
kbt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BCUE_0041
Transfer RNA biogenesis [BR:
kbt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BCUE_0041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
AGF50040
UniProt:
M1ME87
LinkDB
All DBs
Position
689460..691355
Genome browser
AA seq
631 aa
AA seq
DB search
MNMYVFYDEGKSFKTGSIISETENNIQIISEHGKHIKIKQVNCLFKFDTPDPLALMTEAK
NLTKELDAEFLWECSPKNNFKAIDLAEEYFGHRPTNIEYVSVLILLHNSPIYFHKKGTGQ
YISATEYAISSALIGIEKKKLIEQEQEHLKTQMLNGILPKTIHENAELLVTSPDKQSIQW
KALNSACMELQKSPEQLLLSLKTWPNRLILLKKKFISANFPNGLDFPKASNIKKNRNLNL
SNNEIYSIDDKNTIEIDDGLSVRELENGEVEVGIHIAAPGLGIEPGSIYDTNARFRASTI
YMPSEKIQMQPDAILDEFSLDKGKETPALSLYVIFDRDYNIIKSSSCIELVKLKDNLRTN
HLEEEYTASNLDNPEKDVIYSNWIRPLWKIAQKLNSSRQVNRGFSENNSYVDFSIYLEGD
TNNPDTIVQIEKRRRDSPINLVVSEFMILANCLWGGLLKKYHIPGIYRSQQPMSRVKVGT
IPLPHSGIGVPQYIWSTSPLRRYVDLVNQWQLISIVENEIAAPLFSPFRNRGNELLTIIQ
EFELRYSVISNFQNEIENYWYIKWLIQNGIKKTIAHVIKDNLIKLIEVPLFANISDMPKN
PRGTAMEVEITDIDELNCKLTCKYIQRSESI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgtatgttttctacgatgaaggaaaatccttcaagacaggtagtataatctct
gaaacagagaataacattcaaataatctcggagcacggcaaacacataaaaattaaacaa
gtgaattgtttatttaaatttgatactcctgatccacttgctctaatgacagaagctaaa
aatctaacaaaagaactagatgcagaatttctatgggaatgttctcctaaaaacaacttt
aaagctatagacttagcagaagaatattttggacacagaccaacaaatatagaatatgtt
agcgttttgattttattacataactcacctatatattttcacaagaaaggtactgggcaa
tatatatcagctacagaatatgcaatatcttctgctttaatcggcatagagaaaaaaaaa
ttaatagagcaagaacaagaacatctgaaaacccaaatgttgaatggcattctacctaaa
actatacatgaaaatgcagaattattagtaacaagtccagataaacaatcaattcaatgg
aaagcattaaattcagcatgtatggaattgcaaaaatctcctgagcaacttcttctgtca
ttaaaaacatggcctaaccgattaatactattgaaaaaaaaattcatctcagcaaatttt
ccaaacggattagatttccctaaggcttctaatattaaaaaaaatagaaatctaaattta
tccaataatgaaatatactcaatagatgacaaaaatactatagagatagatgatggccta
tctgtaagagagctagaaaatggcgaggtagaagtaggcatacatatagcagctccaggc
ttggggatagaaccaggtagcatatatgatacgaatgcaagatttagagcatctactata
tatatgcctagcgagaaaattcaaatgcaacccgatgcaatattagatgaattctctctt
gataaaggaaaagaaactccagctttatctttatatgttatttttgatagggattacaat
attattaaatctagctcctgtatagaacttgtaaaattaaaagataatttgcgcactaat
catcttgaagaagaatacacagcatctaatttagacaatcctgagaaggatgtaatatac
tcaaactggataagaccattatggaaaattgctcagaagttaaattcctcaagacaagtt
aacagaggattttcagaaaacaattcttacgtagatttttccatttatctagaaggagac
actaataaccctgacaccatagtgcagatagaaaaaagaagaagagattctcctataaat
ttagtagtctcagaattcatgattcttgcaaactgcttatggggggggctactaaaaaaa
tatcatattcctggaatatatagatcccaacaaccgatgagtagagtaaaagttggaact
atacctctaccgcactctgggataggagtaccacaatacatatggagcacttctccacta
cgaaggtatgtagatcttgttaatcaatggcaattaatatctatagttgaaaatgaaata
gctgcgcctctattttccccatttagaaatagaggaaatgagcttctgactataatacaa
gaatttgaactccgatattccgttatatcaaattttcaaaatgaaatagagaattactgg
tacataaaatggctaatacaaaatgggataaaaaaaaccatagcacacgtaatcaaggac
aatttgataaaattaatcgaagtcccactatttgcaaatataagtgacatgccaaaaaac
ccaagaggaacagctatggaagtagaaatcactgacattgatgaattaaattgcaagcta
acctgtaaatatatacagcgatctgaatctatctaa
DBGET
integrated database retrieval system
