Candidatus Kinetoplastidibacterium blastocrithidiae TCC012E: BCUE_0315
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Entry
BCUE_0315 CDS
T02463
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kbt
Candidatus Kinetoplastidibacterium blastocrithidiae TCC012E
Pathway
kbt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCUE_0315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbt03400
]
BCUE_0315
Enzymes [BR:
kbt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BCUE_0315
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BCUE_0315
DNA repair and recombination proteins [BR:
kbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BCUE_0315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
C1_2
Motif
Other DBs
NCBI-ProteinID:
AGF49543
UniProt:
M1LAM8
LinkDB
All DBs
Position
complement(104224..105069)
Genome browser
AA seq
281 aa
AA seq
DB search
MPELPEIELLKREIGPRIQNKTILKFKIRNHKLRWPILASLPKIITDKNVINCSRRGKYL
LFHFEHGVQIIHLGMSGSLQFITNEPPGKHDHIEWTFNDSTILRMNDPRRFGAILWHDIK
NDGTLYDNKIFKNLGLEPFSRKLTEQYLYNKLSNKKKSIKQILLDGNIVVGIGNIYSSES
LFKSKINPLISASKLSISDCAKLILCIRETLCNSIKSGGSTIRNYVSTSGQSGNYIKNHA
SVYGRNELPCNVCGFKIIKIKQSGRSTYYCPNCQNVDKKIT
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccggaaatagaattacttaaaagagagataggaccaaggatacaaaat
aaaactattttaaaattcaaaattagaaatcataagctaagatggcctatactagcttcc
cttccaaaaattataacagataagaatgttataaactgctctcgtagagggaaatattta
ttgtttcattttgaacatggtgtgcaaataatacacttgggaatgtctggatcactgcag
tttataactaatgagccgcctggaaaacatgatcacatagagtggacttttaatgattca
acaatactaagaatgaatgatccaagaagatttggggcaatactatggcatgatataaaa
aatgatggcacattgtacgataataaaatttttaaaaaccttggcttagaaccattttca
agaaaactaacagaacaatacctctataataagctttccaataaaaaaaaatctataaag
caaattcttttggatggaaatatcgtagtaggaattggtaatatatattcctcagagagc
ctatttaaatcaaaaataaacccattaatatcagcatcaaaactttccataagtgactgc
gctaaactaatattatgtatacgtgaaacactatgcaattctattaaatctggaggaagc
actataagaaattatgtaagcactagtgggcaaagcggtaattatatcaaaaatcatgct
tctgtttacggaagaaacgaacttccttgcaatgtatgcggatttaaaataataaaaata
aaacagagcggacgttctacttattattgtcctaattgtcagaatgtagataaaaaaatc
acataa
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