Candidatus Kinetoplastidibacterium blastocrithidiae TCC012E: BCUE_0480
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Entry
BCUE_0480 CDS
T02463
Name
(GenBank) excinuclease ABC subunit B uvrB
KO
K03702
excinuclease ABC subunit B
Organism
kbt
Candidatus Kinetoplastidibacterium blastocrithidiae TCC012E
Pathway
kbt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BCUE_0480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbt03400
]
BCUE_0480
DNA repair and recombination proteins [BR:
kbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCUE_0480
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BCUE_0480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
AAA_30
DUF87
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AGF49680
UniProt:
M1MD38
LinkDB
All DBs
Position
278503..280518
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AA seq
671 aa
AA seq
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MTNNRFVPFSNNSIFNLSKPYKPAGDQPEAIVKLINGISDGLHYQTLLGVTGSGKTYTMA
NIIASIGRPSLILAPNKTLAAQLYSEMRDFFPNNAVEYFVSYYDFYQPEAYIASKDIFIE
KDARINAHIEQMRLSATKSLIERRDTIIVSTVSCIYGIGDMSCYNSMAFSLRLGNLVSRD
NFFKNLIDMQYTRNDIEFSRSTFRVRGEYIDIFPAENFDLAVRVYLVDNEIKKLSLFDPV
IGKMLKDISRFALYPVSHYVVPREKILSAIDSIKEELREQLKFLVDNNKLLEAKRLEQRT
RFDLEMLQETGFCKGIENYTRHLSKLLPGSPPSTLIGYLPSDAIIFIDESHITLGQLSGM
YYGDRSRKETLVRHGFRLPSALDNRPLKFEEFENIVKQCIFVSATPSDYEREHSSNIVEQ
LVRPTGLVDPIVEVRPAKTQIDDILLQIKRTVILKERVFVTTLTKRMSENLTDFLKDNGI
KVRYLHSDIDTVERVEILRDLRIGSFDVLVGINLLREGLDIPEVSLVAIMDADKEGFLRS
ERSLIQTIGRAARNLNGHAILYADNITKSMKKAIEETRRRREKQLEFNSIHGIKAIGIKK
DIRELIDGVVVNNKSLKVDINKNIVKSHKKLSKEIKRLEKSMIDHANKLEFEKAAEVRDS
LNALKELLLFG
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataatagatttgtacctttttctaacaatagtatattcaatctttctaagcca
tataagccagcaggtgatcagccagaggcaattgttaaattgataaatggcatatcagat
ggtttacattaccagacccttttgggggttactggttctggtaaaacttatactatggct
aatattatagcaagtattggcaggccatctctaatattagctcctaataaaacattagca
gcgcaattatattctgagatgagagacttttttcctaataatgcggttgaatattttgtt
tcttattacgatttttatcagccagaggcatatatagcatcaaaagatatctttatagag
aaagatgcgcgtattaatgcacatatagaacagatgcgcttatcagcaactaaaagttta
atagagagacgagatacgattatagtaagcacagtatcttgtatatatggtattggtgac
atgtcttgttataactcgatggctttttctttgcgtttaggcaacttggtctcaagagat
aatttttttaaaaacttaatagatatgcagtacactagaaatgatatagaattttctaga
tccacattccgtgttcgtggtgaatatatagatatttttccggctgagaactttgattta
gccgtaagagtttatcttgtcgataatgagataaaaaaattatcactatttgatccagtt
atcggcaaaatgcttaaggatatatctcgttttgctttgtatcccgtttctcactatgtt
gttccaagagaaaaaatattatctgctatagattctataaaagaagagttaagagagcaa
ttaaaattcttagtagataataataaattgctagaggcaaaacgtttagagcaaaggaca
agatttgatttagagatgttacaggagacaggtttttgtaagggtattgagaattataca
agacatttatctaaattattgccaggatctcctccgagcactttgataggttatttaccg
tcagacgctattatatttattgatgaaagtcatataacattagggcaattatcaggtatg
tattatggagacagatcgagaaaagaaacattggtgcggcatggttttcgtttgccatca
gccttagataatagacctttaaagtttgaagagtttgagaatatagtcaaacaatgtatt
tttgtttccgcaactccttctgattatgagagagaacattctagtaatattgtagagcaa
ctagttaggccaacagggttggtagatccgattgttgaagttagaccagctaagacgcag
attgacgatattttattgcaaataaaaagaacagttatattaaaagagcgagtgtttgtt
acaacattaacaaaacggatgtctgagaatttaactgatttcttaaaggataatggtata
aaagttagatatttgcattcagacatagatactgttgaaagagtggagatattaagagat
ttacgcattggatcttttgatgttttagtaggaataaatcttctgagagaaggattagat
atacctgaggtgtctttggtcgcaatcatggatgcagacaaagagggttttttaagatct
gagcgcagtttaattcagactataggtagggcagctaggaatttaaatggacatgcaata
ttgtatgctgacaatataactaaatcaatgaaaaaggctatagaagagactagaagaaga
agagaaaagcaattagagtttaactctatacatggcattaaagcaattggtattaagaag
gatataagggaacttatagatggagtagttgttaataacaaatcattaaaagttgatatt
aataagaatattgtaaaatcgcataaaaaattatcaaaggagattaaacgattagagaag
tctatgattgatcatgctaataagttggaatttgagaaagcagcagaagttcgtgattct
ttaaatgcattaaaagaacttcttttatttggctag
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