Streptomyces sp. NL15-2K: Q4V64_05390
Help
Entry
Q4V64_05390 CDS
T09250
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kbu
Streptomyces sp. NL15-2K
Pathway
kbu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q4V64_05390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbu03400
]
Q4V64_05390
Enzymes [BR:
kbu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Q4V64_05390
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Q4V64_05390
DNA repair and recombination proteins [BR:
kbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Q4V64_05390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Zn_ribbon_RRN7
Zn_ribbon_8
Ribosomal_S13
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
WKX06959
LinkDB
All DBs
Position
complement(1341584..1342447)
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALKDFLTEHLVGHEIVRVLPVAISVLKTYDPPLTALEGHEVTAVRRYGKFLD
LATDGGPHFVTHLARAGWLHWKDRLPDGPPRPGKGPLALRVALETGAGFDLTEAGTQKRL
AVYVVHDPQEVPGVARLGPDPLADDFDEERFAALLAGERRQLKGALRDQGLIAGVGNAYS
DEILHAAKMSPFKLAASLTPQETHSLYEALRTTLNEAIERSRGVAAGRLKAEKKSGLRVH
ARTGEPCPVCGDTIREVSFSDSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactccccgaggtggaagcgctcaaggacttcctgaccgagcacctggtcggc
cacgagatcgtccgggtgctgcccgtcgcgatcagtgtcctgaagacgtacgaccctccg
ctcaccgccctcgagggccacgaggtcaccgccgtgcgccggtacggcaagttcctcgac
ctcgccacggacggcggcccgcacttcgtgacccacctggcgcgtgcgggctggctgcac
tggaaggacaggctcccggatggcccgccccgccccggcaagggccccctggccctgcgc
gtggccctggagaccggcgcgggcttcgacctgaccgaggcgggcacccagaagcgcctc
gcggtctacgtcgtccacgatccccaggaggtcccgggcgtggcccgcctcggccccgac
ccgctcgccgacgacttcgacgaggagcgcttcgccgccctgctcgccggtgagcgacgg
caactcaagggcgccctgcgtgaccagggcctgatcgcgggcgtcggcaacgcctacagc
gacgagatcctgcacgccgcgaagatgtcccctttcaaactcgcggcctccctcaccccg
caggagacccacagcctctacgaggccctgcgcaccaccctcaacgaggcgatcgagcgc
tcccggggcgtcgcggccggccgcctcaaggccgagaagaagagcggcctgcgcgtccac
gcccgtaccggcgaaccctgtccggtgtgcggcgacaccatccgcgaggtctccttcagc
gactcctcgctccagtactgcccgacctgccagaccggcggcaagcccctcgccgaccgc
aggctgtcccggctgctgaagtag
DBGET
integrated database retrieval system
