Streptomyces sp. NL15-2K: Q4V64_12955
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Entry
Q4V64_12955 CDS
T09250
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kbu
Streptomyces sp. NL15-2K
Pathway
kbu03030
DNA replication
kbu03430
Mismatch repair
kbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q4V64_12955 (dnaE)
03430 Mismatch repair
Q4V64_12955 (dnaE)
03440 Homologous recombination
Q4V64_12955 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kbu03032
]
Q4V64_12955 (dnaE)
03400 DNA repair and recombination proteins [BR:
kbu03400
]
Q4V64_12955 (dnaE)
Enzymes [BR:
kbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q4V64_12955 (dnaE)
DNA replication proteins [BR:
kbu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q4V64_12955 (dnaE)
DNA repair and recombination proteins [BR:
kbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q4V64_12955 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WKX08340
LinkDB
All DBs
Position
complement(2975266..2978805)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAEKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANKTGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGELQTRLRLGQYDEALKAAADYQD
IFGKDRYFLELMDHGIEIERRVRDGLLDIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAVDSSDAWQEGCRNTLLVAEQVDTTGMFEKRD
LMPKFDIPEGYTEVTWFKEEVRRGMERRFPGGIPEDRQRQVEYEMDVIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPSHPRYSEAGEIRAMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAIKMVKA
NKGIDLEMLALPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHINYAERKNGRQEITPIHKELEEPLEEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFTIFQAGAKKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
MSNFAAQGDDVILFGLSAVRNVGTNVVESIIKSRKTKGKYASFPDYLDKVEAVVCNKRTT
ESLIKAGAFDSMGHTRKGLTAHFEPMIDNVVAVKRKEAEGQFDLFGGMGEEETSEPGFGL
DVEFTTDEWDKAYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELQVPDLSNAGTNAPVILTIPATRVTPPMVSRLGEILSHHKGESEVRI
KLQGPRKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcacggctgaaggacatgttcaacgcgtgcaacgagatgggcatgacgcacatcgcg
atgtccgaccacggcaacctccacggggcgtacgacttcttccactcggcggagaaggcc
ggtgtcactccgatcatcggcatcgaggcgtatgtggcgccggagtcgcggcgcaacaag
cgcaagatccagtggggtcagccgcaccagaagcgggacgacgtctccggttcgggtggt
tacacccacaagacgatctgggcggcgaacaaaacgggactgcacaacctcttcaagctc
tcctcggacgcgtatgccgagggctggctgcagaagtggccccggatggacaaggagacc
atctcccagtggtcggaggggctgatcgcctccaccggctgcccgtccggtgagctgcag
acccgcctgcgcctcggccagtacgacgaggcgctgaaggcggccgccgactaccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacgggctcctcgacatcggcaagaagctgggcatccccccgctggtgacg
aacgactcgcactacacgtacgcgcacgaggcgaccgcccacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttcaggttcgacggcacgggctactac
ctgaagtccacggacgagatgtacgccgtcgactcctcggacgcctggcaggagggctgc
cgcaacacgctgctggtggcggagcaggtcgacaccacgggcatgttcgaaaagcgcgac
ctgatgcccaagttcgacatccccgagggctacaccgaggtcacctggttcaaggaggag
gtccgccgcggcatggagcgccgcttcccgggcggcatccccgaggaccgccagcggcag
gtcgagtacgagatggacgtcatcatccagatggggttcccgggctacttcctcgtcgtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtcggccccggccgaggatcc
gccgccggctcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgatcccgcac
ggtctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgatgtcgacatc
gacttcgacgagcgtcggcgcgtcgaggtgatccggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacgtacggcaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccgcctgaccaaggcgatgccg
gccgacgtcctcggcaagggcatcgacctgaacggcatcaccgatccctcgcacccgcgt
tacagcgaggcgggcgagatccgcgcgatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgcggcgggc
gtgatcatgtccagcgaacccatcgtcgaccacgctcccatctgggtgcggcacaccgac
ggcgtgaccatcacgcaatgggactacccccagtgtgagtcgctgggcctgctgaagatg
gacttcctcggccttcgcaacctcacgatcatggacgacgccatcaagatggtgaaggcc
aacaagggcatcgatctggagatgctcgccctcccgctggacgaccccaagaccttcgaa
ctgctctgccgcggtgacaccctcggcgtcttccagttcgacggcggtccgatgcgctcg
ctgctccgccagatgcagcccgacaacttcgaggacatctccgccgtctcggccctctac
cggccaggcccgatgggcatgaactcgcacatcaactacgcggagcgcaagaacggccgc
caggagatcacgccgatccacaaggagctggaggagcccctcgaagaggtcctggccgtc
acctacggcctcatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactcgctcggcgaggccgacatcctccgccgcgtcatgggcaagaagaagcccgaggag
ctggcgaagaacttcaccatcttccaggccggcgccaagaagaacggctacagcgacgag
gcgatccaggccctgtgggacgtgctggtccccttcgccggatacgcgttcaacaaggcc
cactcggccgcgtacggactggtctcgtactggacggcgtacctgaaggcgaactacccc
gccgaatacatggccgcgctgctcacctcggtcaaggacgacaaggacaagtcggccgtc
tacctgaacgagtgccggcgcatgggcatcaaggtgctcccgccgaacgtcaacgagtcg
atgtccaacttcgccgcgcagggcgacgacgtgatcctcttcggcctgtccgcggtgcgc
aacgtcggtacgaacgtggtcgagtcgatcatcaagagccgcaagaccaaggggaagtac
gcgtcgttccccgactacctcgacaaggtcgaggcggtggtctgcaacaagcggaccacg
gaatcgctgatcaaggccggcgccttcgactccatgggacacacccgcaagggactgacc
gcacacttcgagccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcggcatgggcgaggaggagaccagcgagccgggcttcggcctg
gacgttgagttcaccaccgacgagtgggacaaggcatatctgctcgcccaggagcgggag
atgctcggcctgtacgtctccgatcaccccctgttcgggctggagcacgtgctgtcggac
aaggcggacgcgggcatcgcccagctcaccggcggcgagcacgccgacggcgcggtggtc
accatcggcggcatcatctccggcctgcagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtggaggacctcgccggttccatcgagtgcatgttcttcccggcgacg
tatcagctggtgtcgacccaactcgtcgaggacgccgtggtgttcgtcaaaggccgcctc
gacaagcgcgaggacgtcccccggctcgtcgcgatggaactccaggtccccgacctgtcc
aacgcgggcaccaacgcgcccgtgatcctcaccatcccggccacgcgggtcaccccgccc
atggtcagccgcctcggggagatcctcagtcaccacaagggcgagagcgaggtccggatc
aagctccagggaccgcgcaagacgaccgtgctgcgcctggaccgccatcgggtgaagccc
gaccccgccctgttcggcgacctgaaggtgctgctgggaccgtcctgcctggccggatga
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integrated database retrieval system
