Streptomyces sp. NL15-2K: Q4V64_23330
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Entry
Q4V64_23330 CDS
T09250
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
kbu
Streptomyces sp. NL15-2K
Pathway
kbu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kbu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Q4V64_23330
09124 Replication and repair
03420 Nucleotide excision repair
Q4V64_23330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kbu03021
]
Q4V64_23330
03400 DNA repair and recombination proteins [BR:
kbu03400
]
Q4V64_23330
Enzymes [BR:
kbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q4V64_23330
Transcription machinery [BR:
kbu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Q4V64_23330
DNA repair and recombination proteins [BR:
kbu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Q4V64_23330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
ETAA1
IMD
YflT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WKX10275
LinkDB
All DBs
Position
5244621..5246261
Genome browser
AA seq
546 aa
AA seq
DB search
MSCLIVQSDKTLLLEVDHEHADDCRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGHD
AEQVVDALVQYSRYPVPHALLVDIAETMDRYGRLTLSKHPAHGLVLTTTDRPVLEEILRS
KRVAPLVGARIDPDTVLVHPSERGQIKQVLLRLGWPAEDLAGYVDGEAHPIELAEDGWAL
RPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTVSARQWKHELV
KRTSLTEEEIGEYSGTRKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLVIYDEVHL
LPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPAD
CVEVRVNLTDSERLAYATAETEEKYRYCATTETKRKVTEAIVRRFAGQQILVIGQYIDQL
DELGEHLNAPVIKGETSNAQREKLFEAFRQGEISVLVVSKVANFSIDLPEATVAVQVSGT
FGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTLDQDFAAHRQRFLAEQGYAYRIMDAD
ELLAES
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctgcctaatcgtccagtccgacaagaccctgctcctggaagtcgaccacgagcat
gccgacgactgccgtcgggccatcgcgccgttcgccgagctggagcgggcgccggagcac
atccacacctaccgggtgacgccgctcggcctgtggaacgcgcgggcggccgggcacgac
gccgaacaggtcgtggacgcgctggtgcagtacagccgctaccccgtgccgcacgcgctg
ctcgtcgacatcgccgagacgatggaccggtacgggcggctgaccctgtccaagcacccg
gcgcacggcctcgtcctcaccaccaccgaccggccggtcctggaggagatcctgcgctcg
aagcgggtcgccccgctggtcggcgcccgcatcgaccccgacacggtcctcgtccacccc
tccgagcgcgggcagatcaagcaggtactgctgaggctgggctggcccgccgaggacctc
gccgggtacgtcgacggcgaggcgcacccgatcgagctggccgaggacgggtgggcgctc
aggccgtaccagaagcaggcggtggagaacttctggcacggcggctcgggcgtggtcgtc
ctgccctgtggcgccgggaagacgctggtcggcgccggttccatggcgcaggcgaagtcg
accacgctcatcctcgtcacgaacaccgtctccgcccggcagtggaagcacgagctggtg
aagcggacctcgctgaccgaggaggagatcggcgagtacagcgggacgcggaaggagatc
cggccggtcaccatcgccacctaccaggtgctgacgaccaagcggaaaggcgtctacccg
cacctggagctgttcgactcccgggactggggtctggtcatctacgacgaggtgcacctg
ctgccggcgccggtcttcaagttcacggcggacctccaggcgcggcggcggctggggctc
acggccaccctggtgcgggaggacggccgcgagtcggacgtgttctcgctgatcggcccg
aagcggttcgacgcgccgtggaaggagatcgaggcgcagggctacatcgcgcccgcggac
tgcgtcgaggtccgggtcaacctcacggactccgagcggctggcgtacgccactgccgag
accgaggagaagtaccgctactgcgcgacgacggagaccaagcggaaggtcacggaggcg
atcgtccggcgcttcgcgggccagcagatcctggtcatcggccagtacatcgaccaactc
gacgaactgggcgagcacttgaacgcgcccgtcatcaagggcgagacctccaacgcccag
cgcgagaagctcttcgaggccttccggcagggcgagatcagtgtgctggtggtgtcgaag
gtggcgaacttctccatcgacctgccggaggcgacggtcgccgtccaggtgtcgggcacg
ttcgggtcgcggcaggaggaggcgcagcggctgggacgggtgctgcgaccgaaggcggac
ggccaccaggcccacttctactcggtggtggccagggacaccctcgaccaggacttcgcg
gcacatcggcagcggttcctggcggagcaggggtacgcgtaccggatcatggacgcggac
gagttgctggcggagagctga
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