Streptomyces sp. NL15-2K: Q4V64_26900
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Entry
Q4V64_26900 CDS
T09250
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kbu
Streptomyces sp. NL15-2K
Pathway
kbu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q4V64_26900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbu03400
]
Q4V64_26900
Enzymes [BR:
kbu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Q4V64_26900
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Q4V64_26900
DNA repair and recombination proteins [BR:
kbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Q4V64_26900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_8
Zn_ribbon_6
Zn_ribbon_IS1595
Zn_ribbon_TFIIB
Zn_ribbon_SprT
Zn_Ribbon_TF
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WKX10937
LinkDB
All DBs
Position
5983387..5984169
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AA seq
260 aa
AA seq
DB search
MPELPDVEGFRKVLESCAKGRVIRQVDVRDTGVLHDMSERRLREALEGRRFTTPERHGKW
LLAHTGGPTLILHFGMTGRLLCADPSDEPEPHDRVLFTVATDRQLRYRDQRKLQGLWLAE
DDSDIARLLDDQGPDALTVDRDDFEAALASHRGRVKAVLTDQSVLAGLGNLLADEILWRA
ELSPATRSSDLTEPERRHLYTTMRRTLRSAVTAGCVPPRDSWLTGHRDDPDPTCPRCGTH
LHRTRMTGRATLWCPRCQGE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgccagacgtcgagggattccggaaggtactcgagtcctgcgcgaagggc
cgggtcatccgccaggtcgacgtacgcgacacgggcgtcctgcacgatatgagcgagcgg
cggctgcgcgaggcactggaaggccggcggttcaccacaccggagcgccacggcaagtgg
ctgctggcccacacgggcggccccaccctcatcctccacttcggcatgaccggccgactg
ctctgcgccgacccctccgacgagcccgagccccacgaccgcgtcctgttcaccgtggcc
accgaccgccagctccgctaccgcgaccagcgcaagctccagggcctgtggctggccgag
gacgactccgacatcgcacgactgctggacgatcagggcccggacgcgctgacggtggac
cgcgacgacttcgaggccgcgctggcttcacaccgcggccgcgtcaaggcggtcctgacc
gaccagtcggtcctggccggcctcggcaacctgctcgccgacgagatcctgtggcgagcc
gaactgagccccgcgacccgctcgagcgacctcacggagccggaacgccgccacctctac
acgaccatgcgccgcacgctccgctccgcggtcaccgccggctgcgtccccccacgcgac
tcctggctcacgggccaccgagacgaccctgacccaacctgcccacgctgcggcacccac
ctccaccgcacccgcatgacgggccgagccacactctggtgcccccggtgccaaggggag
taa
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