Streptomyces sp. NL15-2K: Q4V64_29325
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Entry
Q4V64_29325 CDS
T09250
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kbu
Streptomyces sp. NL15-2K
Brite
KEGG Orthology (KO) [BR:
kbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kbu03032
]
Q4V64_29325 (topA)
03400 DNA repair and recombination proteins [BR:
kbu03400
]
Q4V64_29325 (topA)
Enzymes [BR:
kbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Q4V64_29325 (topA)
DNA replication proteins [BR:
kbu03032
]
Prokaryotic type
DNA Topoisomerases
Q4V64_29325 (topA)
DNA repair and recombination proteins [BR:
kbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q4V64_29325 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WKX11393
LinkDB
All DBs
Position
6501849..6504671
Genome browser
AA seq
940 aa
AA seq
DB search
MSPTSETAQGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVDHDFQPIYVVNADKRAQVKKLKDLLKDSDELFLATDEDREGEAIAWHLQEVL
KPKVPVKRMVFHEITKAAIQAAVANPRELNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFATGRAGDASDPSSLVARLQTVD
GRRVAQGRDFDSLGQLKSANILHLDEANARALAAALENTRFSVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQIAQKLYENGFITYMRTDSTTLSDTAIAAARAQVTQLYGA
DYLPAQPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQMK
DATGNSVTVKIGGAAADGRDVEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
HEGDALSAEEITVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQAVPWLKRFYFGEGT
GNGGAAEAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGSGIVLRVGRYGPYVERGEKD
SENHQRADVPEDLAPDELSVEYAEELLAKPSGDFELGTDPSTGHQIIARDGRYGPYVTEV
LPEGTPKTGKNAVKPRTASLFKSMSLDTVTLEDALKLMSLPRVVGTDADGVEITAQNGRY
GPYLKKGTDSRSLQSEEQLFTITLEEAQAIYAQPKQRGRAAAKPPLKELGEDPVSKKPVV
VKDGRFGPYVTDGETNATLRSGDSVEEITPERGFELLAEKRAKAPAKKTAKKATAKKAAP
AKKTAAKKTAAKKTTTAVKKTTAKKTTAKKATASKTASED
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcacagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctatctcggccccggatacgtagtcgaggcgagcgtc
gggcacatccgcgacctccccaacggcgccgcggaggtgcccgagaagtacaccggcgag
gtccgccgcctcggcgtggacgtcgatcacgacttccagcccatctatgtggtcaacgcc
gacaagagagcgcaggtcaagaagctcaaggacctgctgaaggactccgacgagctcttc
ctcgccaccgatgaggaccgcgagggcgaggcgatcgcctggcacctccaggaggtgctc
aagcccaaggtcccggtcaagcggatggtcttccacgagatcaccaaggccgcgatccag
gccgccgtcgccaacccgcgcgagctgaaccagaagctggtcgacgcccaggagacccgc
cgcatcctcgaccgtctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgcgcctgtcggccggccgtgtccagtcggtcgcgacacgtctcgtcgtggagcgggaa
cgcgagcgcatcgccttccgttctgctgagtactgggacctgacgggcaccttcgcgacc
ggccgcgcgggggacgcgtcggacccgtcgtcgctggtcgcccgcctccagaccgtcgac
ggcaggcgggtcgcgcagggccgcgacttcgactccctgggacaactcaagagcgcgaac
atcctccacctcgacgaggcgaacgcccgcgccctggccgccgccctggagaacacgcgg
ttctccgtccgctccgtcgagtcgaagccgtaccgccgctcgccctacgccccgttccgt
acgacgacgctccagcaggaagcatcgaggaagctcggcttcggcgcgaaggccacgatg
cagatcgcgcagaagctgtacgagaacggcttcatcacgtacatgcgtacggactccacc
accctgtcggacacggcgatcgccgccgcccgcgcccaggtcacgcagctgtacggcgcc
gactacctgccggcacagccgcggacgtacgccggaaaggtcaagaacgcgcaggaggcg
cacgaggcgatccgcccctcgggtgaccgcttccgcacgcctgccgagaccggcctgacc
ggcgaccagttccggctctacgagctgatctggaagcggaccgtcgcctcccagatgaag
gacgcgaccggtaacagcgtgacggtgaagatcggtggcgccgccgccgacggccgggac
gtcgagttcagcgcctctggcaagacgatcaccttccacggcttcctgaaggcgtacgtc
gagggcgccgacgacccgaacgccgagctggacgaccgcgagcgccgtctgccccaggtc
cacgagggcgacgcgctgagcgccgaggagatcacggtcgacgggcacgccaccaagccc
ccggcccgctacaccgaggccagcctggtcaaggagctcgaagagcgcgagatcggccgc
ccgtcgacgtacgcgtcgatcatcggcacgatcctcgaccgcggctatgtcttcaagaag
ggcacggccctcgtgccgtccttcctgtccttcgccgtggtcaacctcctggagaagcac
ttcgggcggctcgtcgactacgacttcaccgccaagatggaggatgacctcgaccgcatc
gcacgcggcgaggcgcaggccgtgccgtggctgaagcggttctacttcggcgagggcacc
ggcaacggcggcgcggccgaggccggcaacggcgacggggaccacctcggcggcctcaag
gagctggtgaccgacctgggcgccatcgacgcgcgcgaggtgtcgtcgttcccggtgggc
agcggcatcgtgctgcgggtcggacgctacggcccgtacgtcgagcgcggcgagaaggac
tccgagaaccatcagcgcgcggacgtccccgaggacctggccccggacgagctgagtgtc
gagtacgcggaggagctgctcgccaagccgagcggcgacttcgagctgggcaccgacccg
tcgacgggccaccagatcatcgccagggacggacgctacggcccgtacgtcaccgaggtg
ctccccgagggcaccccgaagaccggcaagaacgccgtcaagccgcgtacggcttcgctg
ttcaagtcgatgtcgctggacacggtgaccctcgaggatgccctgaagctgatgtcgctg
ccgcgcgtcgtcggcacggacgcggacggcgtggagatcaccgcgcagaacggccgctac
ggcccgtacctgaagaagggcacggactcgaggtccctgcagtccgaggagcagctgttc
acgatcacgctggaggaggcgcaggcgatctacgcccagcccaagcagcgtggccgggcc
gccgccaagccgccgctgaaggaactgggcgaggacccggtcagcaagaagccggtcgtc
gtcaaggacggtcgcttcgggccgtacgtcaccgacggggagaccaacgcgacgctgcgc
tccggcgacagcgtcgaggagatcaccccggagcgcggcttcgaactcctcgccgagaag
cgggcgaaggcgcccgccaagaagacggcgaagaaggccaccgcgaagaaggccgccccg
gccaagaagacggccgccaagaagaccgcggcgaagaagacgacgacagccgtgaagaag
acgaccgccaagaagaccaccgcgaagaaggcgacggcttcgaagacggcttcggaggac
tga
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