Streptomyces sp. NL15-2K: Q4V64_31890
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Entry
Q4V64_31890 CDS
T09250
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kbu
Streptomyces sp. NL15-2K
Pathway
kbu03420
Nucleotide excision repair
kbu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q4V64_31890 (pcrA)
03430 Mismatch repair
Q4V64_31890 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbu03400
]
Q4V64_31890 (pcrA)
Enzymes [BR:
kbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q4V64_31890 (pcrA)
DNA repair and recombination proteins [BR:
kbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q4V64_31890 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Q4V64_31890 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Herpes_capsid
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-ProteinID:
WKX11864
LinkDB
All DBs
Position
7032975..7035461
Genome browser
AA seq
828 aa
AA seq
DB search
MSSLFDDSFLADLQAHRGHEAEPPPPPEDDHVPEPVPDDLFGGKFDVPPDRDAYYRDGAP
RPAVDAAALLQGLNENQRAAVVHHGTPLLIVAGAGSGKTRVLTHRIAYLLGERRVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQATDGFEKTLAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTSEHPVDVPPGEDDLQPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQ
NYRSTQTILSAANAVIERNESRRPKNLWTNAGAGARITGYVADTEHDEAQFVSDEIDRLT
DAGEAKAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFPQALKRVDEAYGMAARSTNAVKR
FNTLMEDLRTIVESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEF
EQESAEGEASGSLSDFLERVALVADSDQIPDEDEDGSGVITLMTLHTAKGLEFPVVFLTG
LEDGVFPHMRALGETKELEEERRLAYVGITRARERLYLTRSSMRSAWGQPSYNPPSRFLE
EIPPQHVDWKRTGATSPVSSGPASGVAASLSSSRSRSAASGASGFATRRASDKPVVSLAV
GDRVTHDQFGLGTVTAVKGTGANAEATIDFGDDKPKRLLLRYAPVEKL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgatgacagcttcctggcggacctccaggcccaccgcggccacgag
gcagaacctccgccgccgcccgaggacgatcacgtaccggagcccgttccggacgatctg
ttcggcgggaagttcgacgtgccgccggaccgggacgcctactatcgcgacggcgccccg
cgccccgcggtggacgcggccgcgctcctgcaggggctgaacgagaaccagcgcgccgcc
gtcgtgcaccacggcactccgctgctcatcgtggccggcgccggctccggcaagacccgc
gtgctcacccaccgcatcgcctacctgctcggcgagcggcgcgtccacccgggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcaactc
gtcggcccgcgcgcgaacgcgatgtgggtgatgaccttccacagcgcgtgcgtgcggatc
ctgcgccgggagtccaagaagctcggcttcacatcctccttctcgatctacgacgccgcc
gactccaagcgtctgatggccctggtctgccgtgacctggacctcgaccccaagcgcttc
ccgccgaagtccttcagcgccaagatcagcaacctcaagaacgagctgatcgacgaggag
gacttcgccgcccaggccaccgacggcttcgagaagaccctcgcccaggcctacgccatg
taccagtcacggctgcgcgaggcgaacgccctcgacttcgacgacctgatcatgacgacg
gtcaacctgctccgcgcgttcccggacgtggccgagcactaccgccgccgcttccgccac
gtcctcgtcgacgagtaccaggacaccaaccacgcccagtacgccctggtcagggagctc
gtcggcacctccgagcacccggtggacgtcccgcccggcgaggacgacctccagcccgcc
gaactgtgcgtggtgggcgacgccgatcagtcgatctacgccttccgcggcgcgaccatc
cgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctggagcag
aactaccgctccacccagacgatcctgagcgcggccaacgcggtcatcgagcgcaacgag
tcccgccgccccaagaacctgtggaccaacgcgggcgcgggcgcgcgcatcaccggctac
gtcgcggacaccgagcacgacgaggcgcagttcgtctccgacgagatagaccgcctcacg
gacgcgggcgaggcgaaggccggggacgtcgccgtcttctaccgtacgaacgcccagtcc
cgtgtcttcgaagaggtcttcatccgcgtcggcctgccctacaaggtcgtcggcggcgtc
cgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgcgtgctggccaac
ccggaggactcggtcccgctgcggcggatcctgaacgtccccaagcggggcatcggcgac
cgcgccgaggcgatgatcgacgccctgtcccagcgcgagaagatcagcttcccgcaggcc
ctcaagcgcgtcgacgaggcgtacggcatggccgcccgctccacgaacgccgtcaagcgg
ttcaacacgctgatggaggacctccgtacgatcgtcgagtccggcgcgggcccggccacc
gtcctggaggcggtgctggaacggaccggctacctcgccgagttgcaggcctccaccgac
ccgcaggacgagacccggatcgagaacctccaggaactcgcggccgtggccctggagttc
gagcaggagtcggccgagggcgaggcgtccggctcgctctccgacttcctggagcgggtg
gcgctggtcgccgactccgaccagatccccgacgaggacgaggacggctccggcgtcatc
accctgatgaccctgcacaccgccaagggtctggagttcccggtcgtcttcctgaccggc
ttggaggacggcgtcttcccgcacatgcgcgccctcggcgagaccaaggagctggaggag
gagcggcgcctggcgtacgtcggcatcacgcgcgcgcgggaacggctgtatctgacgcgg
tcgtcgatgcggagcgcctgggggcagccgtcgtacaacccgccgtcccgcttcctggag
gagatccccccgcagcacgtggactggaagcggacgggcgccacctcgccggtgtcctcc
ggtccggcctccggggtggcggcctcgctgtcctcctcccgctcgcggtcggcggcgtcg
ggcgcgtcgggcttcgccacgcgccgggcttcggacaagccggtggtctcgctggcggtc
ggggaccgggtgacgcacgaccaattcgggctgggcaccgtgacggcggtgaagggcacg
ggggcgaacgcggaggcgacgatcgacttcggggacgacaagccgaagaggttgctgctg
cggtacgcgccagtcgagaagctgtag
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