Streptomyces sp. NL15-2K: Q4V64_38145
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Entry
Q4V64_38145 CDS
T09250
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
kbu
Streptomyces sp. NL15-2K
Brite
KEGG Orthology (KO) [BR:
kbu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Q4V64_38145
Enzymes [BR:
kbu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Q4V64_38145
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
WKX13038
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Position
8478405..8480345
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AA seq
646 aa
AA seq
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MTRPSRTPHRRRLRHPGTLLAGTLAALLVGTGGMLTLQHSAGAAAPQIPQPTNKAATALA
AARVAEKLDRGLVAVPATGGVLVTWRMLGDDPEGVTFRLYRGGTLIQETAKTNHLDTGGG
SSSTYEIRAVVNGTEVKGGTASVWAGGRRDIPLQKPPGGTTRDGVAYTYSANDASVGDLD
GDGQYELVLKWVPSNATDVANSGTCTGPTVFDAYELNGTRLWRVNLGTNVRSGSHYDSFQ
VYDYNGDGKAEMAVRTSDGSRDSAGTVIGNGSASHLADNCAVISGPEYLSIFNGQTGRVM
DSVPFEPARGSVSDWGDTWGNREGRLLSATAYLNGSTPSMVFSRGIYERVALAAYTWNGT
DLTRTWKFDTNSSTNQGKGYNQQGNHNLAVADVDADGRDEIIYGAMAVDDNGSGLWTTKL
GHGDALHVGDLNPARPGLEAFNVHEHTNSAYGYEMHDARTGQVLWGQRTGTDVGRGLCAD
LTRDHAGAECWSSGGGLYAANGTKISDSVPAFGGGASYNSAIWWDGDANRELLDHRWSGS
AGVGYGQILKYNGSTDLTRIWLDQDAKSNNWTKGNPALSADLLGDWREEMIWRNADSTAL
RLYTTPHPTEYRLPTLMHDPVYRLGIAWQNVGYNQPPQVSYYLGTK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaccagaccgagccgcaccccccaccgtcgccgtcttcggcaccccggcacgctcctc
gccggaacgctcgccgcgctcctcgtcggcaccggcggcatgctcacgctgcaacactcc
gccggcgccgccgcaccgcagatcccgcaaccgacgaacaaggccgccacggcgctggcc
gccgcccgcgtcgccgagaagctggaccgcggcctggtcgcggttcccgccaccggaggt
gttctcgtcacctggcgcatgctcggcgacgacccggagggcgtgacgttccggctctac
cgaggcggcactctcatccaggagaccgccaagaccaaccacctcgacaccggcggcggt
tcgagttcgacgtacgagatccgggccgtcgtgaacggcaccgaggtgaaaggcggcacg
gcctcggtctgggccggcgggcgccgcgacatccccctccagaagcccccgggcggcacc
acccgcgacggcgtggcctacacctactccgccaacgacgcgagcgtcggcgacctcgac
ggcgacgggcagtacgaactggtcctcaagtgggtgccgtccaacgccaccgacgtcgcc
aactccggcacctgcaccggcccgaccgtgttcgacgcctacgagctgaacggcacccgg
ctgtggcgggtcaacctcggcacgaacgtgcgcagcggctcgcactacgactcgttccag
gtctacgactacaacggcgacggcaaggcggagatggccgtccgcacctccgacggctcc
cgggactccgcgggcaccgtcatcggcaacgggagcgcctcccacctcgccgacaactgc
gcggtgatcagcggcccggagtacctgtcgatcttcaacggccagaccggccgcgtcatg
gactccgtccccttcgagcccgcccgcggctcggtctccgactggggcgacacctggggc
aaccgcgagggacggctgctgtcggccaccgcgtacctcaacgggtccacgcccagcatg
gtgttcagccggggcatctacgagcgcgtcgcgctggccgcctacacctggaacggcacc
gacctcacccgcacctggaagttcgacaccaactcctcgacgaaccagggcaagggctac
aaccagcagggcaaccacaacctcgcggtcgccgacgtcgacgcggacggcagggacgag
atcatttacggggccatggccgtcgacgacaacggcagcggcctgtggaccaccaagctg
ggccacggagacgccctgcacgtcggggacctcaacccggcccgcccgggcctcgaggcc
ttcaacgtccacgagcacacgaactccgcgtacggctacgagatgcacgacgcccgcacc
ggccaggtcctgtggggacagcgcaccggcacggacgtcggccgcggcctgtgcgccgac
ctcacccgcgaccacgccggcgccgagtgctggtccagcgggggaggcctctacgccgcg
aacggcacgaagatcagtgacagcgtgccggccttcggcggcggagcgtcgtacaactcg
gcgatctggtgggacggcgacgccaaccgggaactgctcgaccaccgctggtcgggcagc
gccggcgtcggctacggccagatcctgaagtacaacggctccaccgacctcacccgcatc
tggctcgaccaggacgccaagtccaacaactggaccaagggcaacccggcgctctccgcc
gatctgctgggcgactggcgcgaggagatgatctggcgcaacgccgactccacggccctg
cgcctctacaccaccccgcaccccaccgagtaccggctgccgaccctgatgcacgacccg
gtctaccggctcggcatcgcctggcagaacgtcggctacaaccagccgccgcaggtcagc
tactacctcgggacgaaatag
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