Streptomyces sp. NL15-2K: Q4V64_39860
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Entry
Q4V64_39860 CDS
T09250
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kbu
Streptomyces sp. NL15-2K
Brite
KEGG Orthology (KO) [BR:
kbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kbu03016
]
Q4V64_39860
Enzymes [BR:
kbu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Q4V64_39860
Transfer RNA biogenesis [BR:
kbu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Q4V64_39860
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WKX13353
LinkDB
All DBs
Position
complement(8898607..8899785)
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AA seq
392 aa
AA seq
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MLEPREGIPPVIADEEALTEVIAAFAAGSGPVAVDAERASGYRYGQRAYLLQLRREGAGT
ALIDPVACPDLSGLGEALSGVEWVLHAATQDLPCLREIGMLPTRLFDTELAGRLAGFPRV
GLGAMVEGVLGFVLEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEKELDRQGKL
EWAQQEFDAIASAPPPEPRKDPWRRTSGMHKVRRRRQLAVVRELWQTRDRIAQRRDVSPG
KVLSDAAIVEAALSLPANVNALAALNGFGHRMGRRQLEQWQAAVDRAKALTDAQLPQPGQ
AVTGPPPPRAWADKDPAAAARLSAARAGVSALAERLNMPQENLIAPDTVRRVCWEPPNAV
DAESVGAALEGYGARPWQVGLVTSVLVAALSA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ttgctggagccgcgcgagggcattccgcccgtgatcgccgacgaggaagcgctcaccgag
gtgatcgccgccttcgcggccggctccgggcccgtcgccgtcgacgccgagcgtgcgtcc
ggctaccgctacggccagcgcgcctatctgctgcagctgcgtcgcgagggcgccgggacc
gcgctgatcgaccccgtggcctgccccgatctgtcggggctcggtgaggcgctgtccggt
gtggagtgggtgctgcacgccgccacccaggaccttccctgcctgcgcgagataggcatg
ctgcccacacgcctgttcgacaccgagctcgccggccggctcgccgggttcccccgcgtg
ggcctcggcgcgatggtcgagggcgtcctcggcttcgtcctggagaaggggcattcggcc
gtcgactggtcgacccggccgctgcccgagccctggctgcggtatgccgcgctggacgtg
gagctcctcgtcgacctgcgggacgccctggagaaggagctggaccggcagggcaagctg
gaatgggcgcagcaggagttcgacgccatcgcctcggctccgccgccggagcctcgtaag
gatccgtggcggcgtacgtcggggatgcacaaggtgcgcaggcggcggcagctcgctgtc
gtgcgcgagctgtggcagacccgggaccggatcgctcagcggcgggacgtgtcgccgggc
aaggtgctgtcggacgcggccatcgtggaggccgcgctctctcttccggccaacgtgaac
gcgctggccgcgttgaacgggttcgggcatcggatggggcggcggcagctggagcagtgg
caggccgccgtcgatcgggcgaaggcgttgaccgacgcgcagttgccgcagccggggcag
gccgtgaccgggccgccgccgccgagggcttgggccgacaaggatcctgcggctgcggcg
cggttgtcggctgcgcgggcgggggtgtccgcgttggccgagcggctcaatatgccgcag
gagaatctgatcgcgccggataccgtacggcgggtttgctgggagccgccgaatgctgtc
gatgcggagtcggtgggggcggcgcttgaggggtatggggctcggccttggcaggtgggg
ctagtgacttcggtgcttgtcgctgcgctgtccgcgtag
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