Streptomyces sp. NL15-2K: Q4V64_40505
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Entry
Q4V64_40505 CDS
T09250
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
kbu
Streptomyces sp. NL15-2K
Pathway
kbu03030
DNA replication
kbu03430
Mismatch repair
kbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q4V64_40505
03430 Mismatch repair
Q4V64_40505
03440 Homologous recombination
Q4V64_40505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kbu03032
]
Q4V64_40505
03400 DNA repair and recombination proteins [BR:
kbu03400
]
Q4V64_40505
Enzymes [BR:
kbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q4V64_40505
DNA replication proteins [BR:
kbu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q4V64_40505
DNA repair and recombination proteins [BR:
kbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q4V64_40505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WKX13477
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All DBs
Position
9047102..9047821
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AA seq
239 aa
AA seq
DB search
MGWHQELLIGFDLETTGTDPREARIVTAAVIEVRGGQPIGHREWLADPGVEIPADAVAVH
GISNERATAEGRPADQVADAVADVLVAYWKTGVPVVAYNAAFDLSLLSAELRRHGLPSLR
ERLGIDPAPVIDPYTIDRWADRYRRGKRNLEAVCTEYGVPLDSAHDASADALAAARLACA
IAGRHPKVAALGPAELHRRQIEWYAEWAADFQSFLRRKGDAAAVVDGRWPLREFADEPV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgggctggcaccaggagctgctgatcggcttcgacctggagacgaccgggaccgatccg
cgcgaggcgcgcatcgtcacggcggccgtgatcgaggtccggggcgggcagcccataggg
caccgggagtggctggcggatccgggcgtggagatcccggcggacgcggtcgcggtgcac
gggatcagcaacgagcgcgcgaccgccgagggcaggccggccgaccaagtggcggacgcc
gtcgcggacgtcctggtggcgtactggaagacgggcgtgccggtcgtcgcctacaacgcg
gccttcgacctctcgctgctctccgccgaactgcgcaggcacggtctgccgtccctgcgg
gagcgcctcggcatcgaccccgcgccggtcatcgacccgtacacgatcgaccgctgggcc
gaccgctaccgccgaggcaagcgcaacctcgaagcggtctgcacggagtacggcgtcccg
ctcgactccgcccacgacgcctcggccgacgcgctggccgcggcccggctggcctgcgcg
atagccggtcgccaccccaaggtcgcggccctcggcccggcggagctgcaccgccgccag
atcgagtggtacgccgagtgggcggcggacttccagagcttcctgcggcgcaagggcgac
gcggcagcggtggtggacggcaggtggcccctgcgggagttcgccgacgagccggtgtga
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