Streptomyces sp. NL15-2K: Q4V64_40920
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Entry
Q4V64_40920 CDS
T09250
Name
(GenBank) rhamnogalacturonan lyase B N-terminal domain-containing protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
kbu
Streptomyces sp. NL15-2K
Brite
KEGG Orthology (KO) [BR:
kbu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Q4V64_40920
Enzymes [BR:
kbu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Q4V64_40920
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PEGA
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
WKX13556
LinkDB
All DBs
Position
complement(9144785..9146464)
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AA seq
559 aa
AA seq
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MSGSANRPVRRRTFVLGTAAAAGSAALAGPLAQSASAASFGYTDDGSQYIVDTGANLVFK
VSKTNGDLTSLVYRGVEYQGYGGMNSHIESGLGTSTVSIKQSGSTILISVAYGTLKHYYA
ARSGENNVYLWTNKADTSVSATRYIVRVKKGLFLNDEPDSHTYTNSTIEASDVFAKSDGQ
TRSKHFSKLRVMDYDYIGWSGGGVGLWMVRSNHEKASGGPFYRSLLRHQSADGGGLYEIL
YYGQNQTEAQRFGLQGPYVIAFTDGGAPSSSLFPGTLTTSWADSLGLSGYVGASGRGRVA
GVGITGRNTALPYTVGLANSAAQYWGSARASDGYFSIGGVLPGTYTLTVYKSELAVYSTQ
VTVSAGATTTLNSIAIPSSNDPSNASAIWRINDWNGTPSGFKNADLMTYAHPSDVRAAGW
TGNVVIGSGSETSGFPCYLWKDVNSGLLVYFKLTAAQAAAAHTLRIGVTTAYANGRPQVT
VNDTWTSAIPSPPTQPNTRSLTNGSYRGNNHTFTYNVPASAWKTDTSQYNVLRIDVVSGS
GTTGFLSAGTSVDAIDLLA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatccgcgaacaggccggtgcgtcgccgcaccttcgtactcggcaccgcggcg
gccgccggttcggccgccctcgccgggccactcgcgcagagcgcgtccgccgcgagcttc
gggtataccgacgacggttcgcagtacatcgtcgacaccggcgccaacctcgtcttcaag
gtcagcaagaccaacggcgacctgacctcgctggtctaccggggcgtggagtaccagggc
tacggcggcatgaactcgcacatcgagtccggcctcggcacctccaccgtgagcatcaag
cagtccggttcgacgatcctgatctccgtcgcgtacggcacgctgaagcactactacgcg
gcccgcagcggcgagaacaacgtctacctctggacgaacaaggccgacacgtccgtctcc
gcgacccgctacatcgtgcgggtgaagaagggcctgttcctcaacgacgagcccgactcc
cacacgtacacgaacagcaccatcgaggcctcggacgtgttcgcgaagtccgacggccag
acccgctcgaagcacttctcgaagctgcgggtgatggactacgactacatcggctggagc
ggcggcggcgtcgggctgtggatggtgcgcagcaaccacgagaaggcctccggcggcccc
ttctaccgctctctcctgcgccaccagagtgcggacggcggcggcctgtacgagatcctg
tactacggacagaaccagaccgaggcccagcgtttcggcctccagggcccgtacgtcatc
gccttcacggacggcggcgccccctcctcgtcgctgttcccgggcaccctgaccacctcg
tgggcggactcgctcggcctctccggatacgtcggcgcgagcggccggggccgggtggcg
ggcgtcggcatcacgggccggaacaccgcgctcccgtacaccgtcgggctcgccaactcg
gccgcgcagtactggggctcggcgcgagcgtccgacggctacttctcgatcggcggggtg
ctgccggggacgtacacgctgactgtctacaagagcgagttggccgtatacagcacacag
gtgaccgtatccgcgggcgcgacgaccacactcaactcgatcgccatcccctcctcgaac
gacccgagcaacgcgagcgcgatctggcggatcaacgactggaacggcacgccgagcggc
ttcaagaacgccgacctgatgacgtacgcgcacccgtcggacgtccgggcggccggctgg
accggcaacgtggtgatcggcagcggcagcgagacctcggggttcccctgctacctgtgg
aaggacgtcaacagcggtctgctcgtgtacttcaagctgaccgccgcccaggccgccgcc
gcgcacaccctgcgcatcggcgtgacgacggcctacgccaacggccgcccgcaggtcacc
gtcaacgacacctggacgtcggccatcccctcgccgcccacccagccgaacacccggtcg
ctgaccaacggctcgtaccggggcaacaaccacacgttcacgtacaacgtcccggcgtcc
gcgtggaagacggacaccagtcagtacaacgtgctcaggatcgacgtggtgagcggttcg
gggacgaccggcttcctcagtgcgggaacctctgtcgacgcgatcgacctgctggcctga
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