Kosakonia calanthes: AAEY27_01220
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Entry
AAEY27_01220 CDS
T10644
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
kca Kosakonia calanthes
Pathway
kca00330
Arginine and proline metabolism
kca00480
Glutathione metabolism
kca01100
Metabolic pathways
kca01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
kca00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
AAEY27_01220 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AAEY27_01220 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
AAEY27_01220 (speF)
Enzymes [BR:
kca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
AAEY27_01220 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
ADAMTSL1
B277
Motif
Other DBs
NCBI-ProteinID:
WZV98550
UniProt:
A0ABZ3B776
LinkDB
All DBs
Position
complement(296309..298495)
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AA seq
728 aa
AA seq
DB search
MSDLKIAVSTSCIGCFSTQRSIVNIDETKFIDVAAVVLSVNDIERGKLDEILATGYGIPV
FVVTEGDECVPAEHLPRISGVFELNESRTEFYGRQLETAASHYETQLRPPFFRALVDYVA
QGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGETLFRSDLCNADVAMGDLLIHEGAPCIAQ
QHAAKVYNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPI
YLETARNPYGFIGGIDAHCFEEDYLRELISEAAPKRAKDARPFRLAIIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLELNENDPGILVTQSVHKQQAGF
SQTSQIHKKDSHIKGQSRYVPHKRMNNAFMMHASTSPFYPLFAALDINAKMHEGVSGRNM
WMDCVANGIDARKLILDNCQHIRPFVPETVDGKPWQSYATSEIANDLRFFHFIPGERWHA
FEGYAEHQYFIDPCKLLLTTPGINARTGEYDAFGVPATILANFLRENGVVPEKCDLNSIL
FLLTPAEDMAKLQQLVALLVRFEKLLESDAPLSEVLPSLYKQYEDRYAGYSLRQLCQEMH
DLYARHDVKQLQKEMFRKSHFPRVTMNPQEANYAYLRGEVELVRLPEAEGRIAAEGALPY
PPGVLCVVPGEVWGGAVLRYFTALEEGINLLPGFAPELQGVYLEEHDGRKQVWCYVIKPR
EAQKGETL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttaaaaatcgctgtaagtacttcctgtattggttgtttttcaacacagcgc
agcatcgtaaatattgatgaaaccaagtttattgatgttgctgccgtcgtgttatctgtc
aatgatattgaacgcggtaaactcgacgaaattctcgccaccggctacggcattcctgtt
tttgtcgtgaccgagggtgatgagtgcgtcccggcggagcaccttccgcgcatttcaggc
gtgtttgaacttaacgagtctcgcaccgagttttatggtcgccagttggaaacagccgcc
agccattatgaaacgcagctgcgtccgccgttctttcgcgcactggttgattacgtggcg
cagggcaacagcgcgtttgactgcccagggcaccagggcggcgagtttttccgtcgccat
ccggcaggcaatcagtttgttgaatactttggcgaaacgcttttccgctccgatctgtgt
aacgcagacgtcgcgatgggcgatctgctgatccacgaaggcgcgccatgcattgcccag
caacacgcggcaaaggtgtataacgcggataaaacctacttcgtgctgaacggtacgtcg
tcctccaacaaagtggtgcttaacgcgctgctgacgccgggcgatctggtacttttcgac
cgtaataaccacaaatccaaccaccacggcgcgttactgcaagccggtgcgacaccgatc
tatctggaaaccgcgcgtaacccgtatggcttcatcggtggtattgatgcgcactgtttc
gaagaagattatctgcgcgagctgattagcgaagccgcgccaaagcgtgcgaaagatgcg
cgcccgttccgtctggcgatcattcagctgggtacttacgacggcacaatttataacgcc
cgtcaggtagtggataagattggtcacctgtgtgactacattctgtttgactccgcgtgg
gtcggttacgagcagttcatcccgatgatggctgattgctcgccgctgctgctggaactg
aatgaaaacgatccgggcattctggtgacccagtctgtgcacaaacagcaggccggtttc
tcccagacgtcgcagatccacaaaaaagacagccacattaaaggccagtctcgctatgta
ccgcataagcgtatgaacaacgcgttcatgatgcatgcctccaccagcccgttctacccg
ctgtttgccgcgctggatatcaacgccaaaatgcatgaaggcgtgagcggtcgcaacatg
tggatggactgcgttgcgaacggcatcgacgcacgcaaactgatcctcgacaactgccag
cacatccgtccgtttgtgccggaaaccgttgatggcaaaccgtggcagtcctatgccacc
tcagaaatcgccaacgatctgcgtttcttccacttcattccgggtgaacgctggcacgca
ttcgaaggctacgccgaacatcagtatttcattgacccttgcaaactgctgctcaccacg
ccgggcatcaacgcgcgcaccggtgaatatgacgcctttggcgttccggccaccatcctc
gccaacttcctgcgtgaaaacggcgtggtaccggaaaaatgcgacctcaactcgatcctg
ttcctgctgaccccggcggaagacatggcgaagttgcaacagcttgtcgcgctgctggta
cgtttcgaaaaactgctggagtccgatgcgccgctgtctgaggttctgccttctctgtac
aagcagtacgaagatcgttacgccggttacagcctgcgccagctgtgccaggaaatgcat
gacctgtacgcacgtcatgatgtgaaacagctgcaaaaagagatgttccgcaaatcccac
ttcccgcgcgtcaccatgaacccgcaagaagccaactacgcctatctgcgtggtgaggtt
gagctggttcgtctgccggaagccgaaggccgtatcgcggcggaaggtgcgcttccttac
ccgccgggcgtgctgtgtgtggttccgggcgaagtatggggcggcgcagtactgcgttac
ttcaccgcactggaagagggtatcaacctgctgccgggctttgcgccagaacttcagggc
gtgtacctcgaagagcatgacggccgtaaacaggtttggtgctacgtcattaagcctcgc
gaagcacagaaaggggaaacgctgtga
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