Kosakonia calanthes: AAEY27_02820
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Entry
AAEY27_02820 CDS
T10644
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kca Kosakonia calanthes
Pathway
kca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAEY27_02820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kca03019
]
AAEY27_02820
03009 Ribosome biogenesis [BR:
kca03009
]
AAEY27_02820
Enzymes [BR:
kca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAEY27_02820
Messenger RNA biogenesis [BR:
kca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAEY27_02820
Ribosome biogenesis [BR:
kca03009
]
Prokaryotic type
rRNA helicases
AAEY27_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
Cas3-like_C_2
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WZV98849
LinkDB
All DBs
Position
622752..624662
Genome browser
AA seq
636 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSRLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQLQLESSDLDQYRALLAKIQPSSEEEMDI
ETLAAALLKMAQGERPLILPPDAPMRPRREFRERDERFERRGDRNDRAPRGERAERGGED
RPRRERRDVGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELP
KGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRERSERRPAGGGERRGGFGGERREGGRGG
EGRRFSGERQEGRGFGGERRAPRRDDSTTSRRRNDA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctcggttacgaaaaaccatctccgatccaggctgagtgcattccgcacctg
ctgagcggtcgtgacgtgctgggtatggcccagactggtagcggtaaaacggcagcgttt
tctctgccgctactcaataacatcgatccggacctgcgtgcgccgcagatcctcgtgctt
gctccgacccgcgaactggcggttcaggtagctgaagcaatgaccgatttctctaaacat
atgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggcccgcagatcgtggtcggtacgccgggtcgtctgctggatcacctg
aaacgcggcacgctggatctctctcgcctgagcggtctggtgctggatgaagccgacgaa
atgctgcgcatgggctttatcgaagacgttgaaaccatcatggcgcagatcccggagggt
catcagaccgctctgttctctgcaaccatgccggaagctatccgtcgcattacccgtcgc
tttatgaaagacccgcaggaagtgcgcattcagtccagcgtgactactcgtccggacatc
agccagagctactggactgtgtacggcatgcgtaaaaacgaagcactggttcgcttcctg
gaagctgaagatttcgacgcggcgatcattttcgtgcgtaccaaaaacgcaacgctggaa
gtcgccgaagcgctggagcgcaatggttacaacagcgccgcgctgaacggtgacatgaac
caggcgctgcgtgagcagactctggagcgcctgaaagacggtcgtctggatatcctgatc
gcgaccgacgttgcggcccgtggtctggacgttgagcgtatcagcctggttgttaactac
gacatcccgatggattccgaatcctacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctgggcgcgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatc
gaacgtacaatgaagctgaccattccggaagtagaactgccgaacgcagaactgctgggc
aaacgccgtctggaaaaattcgcagccaaagttcagctgcaactggaaagcagcgatctg
gatcagtaccgtgcgctgctggcgaaaatccagccttcttctgaagaagagatggacatc
gaaacgctggccgctgcactgctgaaaatggcacagggcgaacgtccgctgattctgccg
ccggatgcgccgatgcgtccgcgtcgtgaattccgcgaacgtgatgagcgtttcgaacgt
cgtggcgatcgtaacgatcgtgccccgcgtggcgaacgtgctgagcgtggcggtgaagat
cgtccgcgtcgcgaacgtcgtgatgttggcgaaatggaactgtaccgcattgaagtgggt
cgtgatgacggtgttgaagttcgtcatatcgttggcgcaattgctaacgaaggtgatatc
agcagccgttacatcggtaacatcaagctgttcggtactcactccactatcgagctgccg
aaaggcatgccgggcgaagtcctgcaacacttcactcgcacgcgtattctgaacaagccg
atgaatatgcagctgctgggcgatgcacaaccgcgtgagcgcagcgaacgtcgtcctgcc
ggtggcggtgaacgtcgcggtggtttcggtggcgaacgtcgtgaaggcggtcgcggtggt
gaaggtcgccgtttcagcggtgaacgtcaggaaggtcgtggttttggtggcgaacgccgc
gcaccgcgccgtgacgacagcaccaccagccgtcgtcgtaacgacgcgtaa
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