Kosakonia calanthes: AAEY27_04230
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Entry
AAEY27_04230 CDS
T10644
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kca Kosakonia calanthes
Pathway
kca03410
Base excision repair
kca03430
Mismatch repair
kca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AAEY27_04230 (recJ)
03430 Mismatch repair
AAEY27_04230 (recJ)
03440 Homologous recombination
AAEY27_04230 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kca03400
]
AAEY27_04230 (recJ)
DNA repair and recombination proteins [BR:
kca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AAEY27_04230 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AAEY27_04230 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AAEY27_04230 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
WZV99114
UniProt:
A0ABZ3B707
LinkDB
All DBs
Position
896207..897940
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AA seq
577 aa
AA seq
DB search
MKAQIQLRRREVDNSLELADSLPPLLRRLYASRGVRNASELERSVKGMLPWQQLTGINEA
VTHLYNALREGLRIMVVGDFDADGATSTALSVLALRALGCDNVSYLVPNRFDDGYGLSPE
VVDQAHARGAQLILTVDNGISSHTGVARAHELGIPVVVTDHHLPGDTLPEAEAIVNPNLR
DCDFPSKSLAGVGVAFYLMLALRAFLRDNGWFDARGLAMPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGRCRPGIKALLEIANRDAQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNLGEARQLASDLDALNQTRKEIEQGMQAEALTLCEQLERSRETLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGVLKGSGRSIQGLHMRDALERLDMLFP
GMMLKFGGHAMAAGLTLEEARFDEFQQRFGELVTEWLDPSLLQGEIVSDGPLTAQEMTLE
VAEMLREAGPWGQMFPEPLFDGEFRLLQQRLVGERHLKMMLEPVGGGPLLDGIAFNVDTT
CWPDNGVRQVNIAYKLDVNEFRGNRSVQLIIENLWPL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagctcagatacaacttcgccgccgtgaggtggataactcgctagaactggcagat
tcattgccgccattgctgcgtcggctttatgccagccggggcgtacgcaatgccagtgaa
ttggagcgcagcgtgaaaggcatgctgccgtggcagcaactgaccggtatcaatgaggcg
gtgacacacctttacaatgcgttgcgcgaagggttgcgcattatggtggtgggcgacttc
gacgcggacggcgcaaccagtactgcgctgagtgtgctggcgctgcgcgcgctgggttgc
gacaacgtgagttatctggtaccgaaccggtttgatgacggctacggccttagcccggaa
gtggtcgatcaggcgcatgcccgtggcgcacagctgatcctgacggtagataacggtatc
tcttcccatactggtgtggcgcgagcgcacgaattggggatcccggtcgtggtgaccgat
caccacctgcccggcgatacgctgccggaagcggaagcgattgttaacccaaacctgcgc
gactgtgatttcccgtcgaaatcgctggctggggttggcgtcgcgttttatttgatgctg
gcgctgcgtgcatttctgcgcgacaacggctggtttgacgcacgtggtttagccatgccg
aaccttgctgagctgctcgatctggtcgcgctcggtacggtggcggatgtggtgccgctg
gatgccaacaaccgtattctcacctggcaggggctgagccgtattcgcgccgggcgttgc
cgaccgggcatcaaagcactgctggaaattgccaatcgcgatgcgcaaaagctggcggcc
agcgacctgggttttgcgctcgggccgcgcctgaatgcggcgggcaggctcgatgatatg
tcggttggtgtcgcgctgttgttgtgtgacaacctcggcgaagcgcgccagcttgccagc
gaccttgatgcgctcaaccagacacgcaaagagattgagcaaggcatgcaggccgaggcg
ctaacgctgtgcgaacagttagagcgcagccgcgaaacgctgcccggcgggctggcgatg
taccatcccgaatggcatcagggcgttgtcggtattcttgcgtcgcgtatcaaagagcgt
ttccaccgcccggtcattgcgtttgcgcctgccggagacggcgtgctgaaaggttctggg
cgttctattcaggggctgcatatgcgcgatgcgctggagcgcctggatatgctcttcccc
ggcatgatgttgaagtttggtggccacgcgatggcggccggtctgacgctggaagaagcg
cgttttgacgagttccagcaacgtttcggcgagctggtcaccgagtggctggatccgtcg
ttattgcagggcgaaattgtctccgatgggccgctaacggcgcaggagatgacgcttgag
gtcgcggaaatgcttcgtgaggccggtccctgggggcagatgttcccggaaccgctgttc
gacggcgagtttcgcctgttgcagcagcggctggtgggcgagcgtcatttgaagatgatg
ctggagccggtcggcggcggcccattgcttgatggcatcgcgtttaacgtcgataccacc
tgctggccggacaacggcgtgcggcaggtgaatattgcttataaacttgatgtaaacgag
tttcgcggcaaccgtagcgtgcagctaatcatcgagaatctctggccactttag
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