Kosakonia calanthes: AAEY27_04635
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Entry
AAEY27_04635 CDS
T10644
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
kca Kosakonia calanthes
Pathway
kca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAEY27_04635 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kca03019
]
AAEY27_04635 (rppH)
Messenger RNA biogenesis [BR:
kca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AAEY27_04635 (rppH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
WZV99189
UniProt:
A0ABZ3B775
LinkDB
All DBs
Position
986291..986821
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AA seq
176 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVMWAKRFGQHSWQFPQGGINPGESPEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSNDSDINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFAAAVLLLQETPPKPQNAPAWRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccaaatgtgggaatcgtaatctgtaatcgacagggt
caggtcatgtgggccaaacgctttggacaacactcatggcagttcccccaggggggaatc
aaccctggtgagtccccggagcaggccatgtaccgggaactgttcgaggaagtgggctta
agtcgtaaagatgttcgtatccttgcttctacccgtaactggttgcgttacaagttaccg
aaacgtttggtgcgttgggacacaaagccggtttgtatcggccagaaacaaaaatggttt
cttttgcagttggtcagtaacgatagtgatatcaacatgcaaaccagcagtacacccgag
ttcgatggctggcgttgggtgagctactggtaccctgttcgccaggttgtgtcgtttaaa
cgcgatgtctaccggcgggtgatgaaagagtttgcagccgcagtcttgttgcttcaggaa
acgcctcctaagccgcaaaacgcgcctgcctggcgacgtaaacgaggttaa
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