Kosakonia calanthes: AAEY27_08540
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Entry
AAEY27_08540 CDS
T10644
Symbol
pocR
Name
(GenBank) regulatory protein PocR
KO
K27259
AraC family transcriptional regulator, pdu and cob operon regulator
Organism
kca Kosakonia calanthes
Brite
KEGG Orthology (KO) [BR:
kca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kca03000
]
AAEY27_08540 (pocR)
Transcription factors [BR:
kca03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AAEY27_08540 (pocR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PocR
HTH_AraC
HTH_18
Motif
Other DBs
NCBI-ProteinID:
WZV99911
UniProt:
A0ABZ3B9B1
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Position
1831464..1832375
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AA seq
303 aa
AA seq
DB search
MISASTLNSELINKIAQDFAQATGLAVVVVNIHGEEISELFNFTPFCQRMRQHPQHSIRC
RMSDRCGGFEASKSNQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLRDKDGVELVD
ILNIDDRWQADPTLVDAFHCVPEMDYSRVIASADLLQLIVENCLKKQLNFVVIKDQQQQS
DSARAARNQGPHDSKMKKALRYIDAHLSDELRLEDVAAHVYLSPYYFSKLFKKYQGIGFN
AWVNQQRMASAREMLRHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQVFRLQNNANY
DGD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgcgagtacactaaactccgaactcattaataaaatcgcccaggattttgca
caagccaccggtctggccgttgttgtggtgaatatccacggcgaagagatttccgagctg
ttcaatttcaccccgttttgccagcgtatgcgacagcatccgcagcacagcattcgttgt
cgcatgagcgatcgctgtggcggttttgaagcctccaaatcgaaccagccctgcatttat
cgctgtcatgccgggctcactgatttttcgatcccactggtgattgccgggcatctggtg
gggtttgtgctgtgcggacaggtgcgtctgcgtgataaagacggcgtggagctggtggat
attctcaatattgacgaccgctggcaggccgacccgacgctggtcgacgcgtttcactgc
gtgccggaaatggactattcgcgcgtgattgcctcggcggatttgttgcagcttattgtc
gaaaattgtctgaaaaaacagcttaatttcgtggtcatcaaagaccaacagcagcagtcg
gattcggctcgcgctgctcgtaatcaggggccgcacgacagcaaaatgaagaaggcgctg
cgctatatcgacgcccatttgtccgatgagttgcggctcgaagacgttgccgcgcatgtt
tatctcagcccttactatttcagcaagttgtttaaaaaatatcagggcattggctttaac
gcgtgggtcaaccagcaacgtatggctagcgcgcgggaaatgctccgtcatagcgactgg
agcatcgccagtattgcccgtaatttaggtttttcgcaaaccagctatttttgcaaagtt
tttcggcagacctatcaggtaacgccgcaggtatttcgtttgcagaataatgcaaactat
gacggcgattaa
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