Kosakonia calanthes: AAEY27_09155
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Entry
AAEY27_09155 CDS
T10644
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
kca Kosakonia calanthes
Pathway
kca02020
Two-component system
kca02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AAEY27_09155
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AAEY27_09155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kca03021
]
AAEY27_09155
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
kca02035
]
AAEY27_09155
Transcription machinery [BR:
kca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AAEY27_09155
Bacterial motility proteins [BR:
kca02035
]
Flagellar system
Flagellar assembly proteins
Stator
AAEY27_09155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0147
TFIIE_alpha
SapB_1
Motif
Other DBs
NCBI-ProteinID:
WZW00025
UniProt:
A0ABZ3BA09
LinkDB
All DBs
Position
1953237..1953956
Genome browser
AA seq
239 aa
AA seq
DB search
MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVDRYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAMGQLEQELGRNATETEV
SQRLGIPVEEYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQQENPLFQLMESNLRH
RVMEAIESLPEREQLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcactctataccgctgaaggtgtaatggataaacactcgctgtggcagcgttat
gtacctcttgtgcgtcacgaagcattgcgcttgcaggtgcgcttgccggcgagtgtggaa
ctggacgacctgctacaggcgggcggcatcggtctattaaatgcagtagatcgctatgac
gctctgcaaggaacggcatttacgacttacgcagtacagcgtattcgtggggcaatgctg
gacgaattgcgcagccgagattgggtaccgcgcagcgttcggcgaaatgcccgcgaagtg
gcgcaggcaatggggcagctagagcaagaactggggcgtaacgcgacggaaacagaagtg
tcgcagcgtcttgggattcctgtcgaggagtaccgtcagatgttgctcgataccaataac
agccagcttttctcctatgacgaatggcgagaagagcacggcgacagtatcgagctggtg
acggacgatcatcaacaggaaaacccgttattccagctgatggaaagtaatttacgtcac
cgggtgatggaagcgattgagtcgctgccggaacgtgaacaacttgtcctgacgctttac
taccaggaagagctgaatctcaaagagattggcgcggttctggaagtaggggagtctcgg
gttagccagcttcatagccaggccattaagcgcttacgtactaaactgggtaagttatag
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