Kosakonia calanthes: AAEY27_14925
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Entry
AAEY27_14925 CDS
T10644
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kca Kosakonia calanthes
Pathway
kca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAEY27_14925 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kca03019
]
AAEY27_14925 (rhlE)
Enzymes [BR:
kca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAEY27_14925 (rhlE)
Messenger RNA biogenesis [BR:
kca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAEY27_14925 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
PCF11_RFEG_rpt
AAA_19
HI1480
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
WZV96967
UniProt:
A0ABZ3B1J1
LinkDB
All DBs
Position
complement(3185498..3186943)
Genome browser
AA seq
481 aa
AA seq
DB search
MSFDALGLNPEILRAVAEQGYLQPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QRLVQNEPHAKGRRPVRALILTPTRELAAQVGENVREYSQYLNIRSMVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNALKLDSIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKQLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGITSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIALDGYEPDPSIKAEPIQNGRGQGGGGRGQSAPRRNDGEAQKPRSPRRSE
GGAAKPAGGRRSEGGTAKPAGGRRSEGGAAKPTGGRRLDGGAAKPAGNQSRRRPRKPSSA
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatgcccttggcctgaatccggaaatcctgcgcgcagtcgcagagcagggt
taccttcagccaacccctattcagcagcaggctatcccggcggttctgcaaggccgcgat
ctgatggcgagcgcgcaaaccggtaccggtaaaaccgcaggttttacactgccgttgctg
cagcgcctggtgcagaatgaaccgcatgctaaagggcgtcgcccggtgcgtgcgctgatc
ttaacgccgacccgtgaactggcggcgcaggtgggcgaaaacgtacgtgagtacagccaa
tacctgaatattcgttccatggtggttttcggtggggtgagcattaacccgcagatgatg
aaactgcgcggcggcgtggatgtgctggtcgctacaccgggccgtctgctcgatcttgaa
caccaaaatgccctgaaactcgatagcatcgaaatcctcgtgttggatgaagccgaccgc
atgctggacatgggctttatccacgatattcgccgcgtgctggcgaaactcccggcgaaa
cgccaaaacctgctgttttctgcgaccttctctgacgagatcaaacagctggcggaaaaa
ctgctgcacaacccgctggaaattgaagtcgcacgtcgcaacaccgcgtctgagcaggtc
acgcagcatgtgcatttcgtggacaaaaaacgcaaacgggaactgctgtcacagatgatt
ggcgagggcaactggcagcaagtgctggtctttacccgtaccaaacacggtgccaaccac
ctggctgaacagctgaataaagatggcattaccagtgccgcgatccacggtaacaagagc
cagggggcacgtactcgtgcgctggcggatttcaaatccggggatattcgcgtgctggtg
gcaaccgatatcgccgcgcgtggtctggatattgaagaactgccgcacgtagtcaactac
gagttgccgaacgtgccggaagattatgttcaccgtattggccgtaccggccgagcggcg
gccaccggcgaagcgttgtcgttggtttgcgttgatgaacataaactgctgcgcgacatt
gagcgcctgttgaaaaaagagatcccgcgcattgccctggacggttatgaaccggatcca
tcgatcaaagccgaacccatccagaatggccgtgggcagggcggcggtggccgtggtcag
tccgcgccgcgccgcaatgacggtgaagcgcaaaaaccacgctcgccgcgtcgcagtgaa
ggtggcgccgcaaaaccggcgggtggacgtcgcagtgaaggcggcaccgcgaaaccggcg
ggtggacgtcgcagtgaaggcggcgccgcgaaaccaaccggtggacgccgtcttgatggc
ggcgctgcgaaaccggcaggtaatcaatctcgccgtcgcccgcgtaaaccgtcctccgcg
cagtaa
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