Kosakonia calanthes: AAEY27_17000
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Entry
AAEY27_17000 CDS
T10644
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
kca Kosakonia calanthes
Brite
KEGG Orthology (KO) [BR:
kca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kca03400
]
AAEY27_17000 (sbcC)
DNA repair and recombination proteins [BR:
kca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AAEY27_17000 (sbcC)
Archaeal homologous recombinant proteins
AAEY27_17000 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
nSTAND3
ABC_tran
DUF7491
GspA_C39-like
AAA_21
cobW
ABC_ATPase
MobB
AAA_22
GATase_2
Motif
Other DBs
NCBI-ProteinID:
WZV97349
LinkDB
All DBs
Position
3611948..3615088
Genome browser
AA seq
1046 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTEEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR
LSTLSQSQNDLMTRDTADCLAEVEFEVKGVAYRAFWSQTRARGLADGNLQAPRVELATCA
DGKILADKVKDKLDLTASLTGLDYGRFTRSMLLSQGQFAAFLNAKPRERAELLEELTGTE
IYGQISAMVFEKHKTAKTQLENLQAQAEGVVLLNDEQRQQLTQSLQALTDEEQTLLAGQR
AVQTQAQWLNRDAELHAARGRAQAALAQAQQSLASAQPQLAALERAQPAQQLRPLWDRLE
EQRKALARTRSQSEEVNARLHASLSLRARIRFSAGQQHAALLASRKTLDSWLTEHARFER
WQSELTGWRVLFNQLEEEKKQWQGLQQRVQSHEARLRTLPTSTLELSSEETSAAMALCAQ
NRPLRQQLTALHARFAPLRKQLTQRQQSLLDLKAEQEKLNAELARKRDLYKEKNQLLSEV
RTICELESRIKDLESERARLQPGHPCPLCGATEHPAVAQYQAIEPGVNQTRFNALDLEVR
EMKEAGVALSERLKGLSERYEKDEREAKTLQQEEQAWLEDWAKACAMLNVTLEPHRDLTS
WQSAQDAYEQQLYLLNQRQTLQQQITELRQQSEQYQQAVANRRDSLASALATLDLALPPE
GEEPQWLAARAQEAQQWQHQQQQLAALQERVALLTPILDTLPEDDTPADGQTVALEGWRK
VHDECLSLKSQWQTLQQQLVQEFNTESALEKQFTDALVNSVFADQQAFLSALLDDGERLR
LEQLRQKLDADCQQKQVLAASAEQAVAAHQAQRPADLQENATAESAGLALENVSRQLREN
TTRQGEFRQQLKQDADNRTRQQTLLQQIEQAIARCDDWGHLNALIGSKEGDKFRKFAQGL
TLDNLVWLANNQLTRLHGRYLLKRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSLA
LALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMKE
RIPVQIKVKKINGLGYSKLDGKYAVL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcttacgcttaaaaaacctcaattcgctgaaaggcgagtggaaaatc
gatttcaccgaagagccgttcgccagcaatggcttatttgccattaccggcgcgaccggc
gcggggaaaaccacgttactggatgcgatttgtctggcgctgtaccacgaaacgccgcgc
ctgagcaccttgtcgcaatcgcaaaacgatttaatgacccgcgacaccgccgactgcctg
gcggaagtggaatttgaagtgaaaggcgtcgcttaccgggcgttctggagccagacccgc
gcccgtgggctggcggatggcaacttgcaggcgccgcgcgtcgagcttgccacctgcgcc
gacggcaaaatccttgccgataaagtgaaagataaactcgatctcactgcctcgctcacc
gggctggactatgggcgtttcacccgctcgatgctgctgtcacaaggccagttcgccgcg
tttctcaatgccaaaccccgcgaacgcgcggagttgcttgaagagctaaccggcaccgaa
atttacgggcaaatttcggcgatggtgtttgagaaacacaaaaccgcgaaaacccagttg
gagaatttacaggcgcaggctgaaggcgttgttttactcaacgatgagcagcgccagcag
cttacgcaaagtttgcaggcacttactgacgaagagcaaaccttgctggccgggcaacgc
gccgtgcagacgcaggcgcaatggctgaaccgcgatgcggaattacacgccgcgcgcggg
cgggcgcaggccgcgctggcgcaagcacagcagtcgctggccagcgctcagccgcagttg
gcggcactggaacgggcacaaccggcgcagcagttgcgcccgctgtgggacaggctcgaa
gaacaacgtaaagcgctggcgcgcactcgcagccagagtgaagaagtgaatgctcgctta
catgccagcctgtcgctgcgcgcgcgcattcgttttagcgcgggtcagcagcatgccgcg
ttgttggcgtcgcgaaaaacgctggacagttggctcacagagcatgcgcgttttgagcgc
tggcagagtgaactcaccggctggcgcgtactgttcaatcagttagaagaagagaaaaaa
cagtggcaaggcttgcaacaacgcgtgcaaagccatgaagcgcgtttgcgcacgctgccg
acttcgacgctggaattaagcagtgaagagacgtctgccgccatggcgctttgcgcgcaa
aaccgcccgctgcgccagcaacttaccgctttgcacgcccgtttcgcgccgctgcgtaag
caactaacccagcgccaacaaagtttgttggatctgaaagcggagcaggaaaagctcaac
gccgagttggcgcgtaaacgcgatctgtataaagaaaaaaaccagctactgagcgaagtg
cgcaccatctgcgaactggaaagccgcatcaaagatctggagagcgaacgcgcgcgcctg
caaccggggcacccctgcccgctgtgcggcgcgacggaacatccggcggttgcgcagtat
caggccatcgaacccggcgtcaatcagacccgttttaacgcgctggatcttgaagtgcgc
gagatgaaagaagctggcgtcgccttgagcgagcggcttaaagggctgagcgaacgctat
gaaaaagatgagcgcgaagccaaaaccttgcagcaggaagaacaggcctggttagaggat
tgggccaaagcctgcgcgatgctgaatgtcacgcttgaaccgcatcgcgatctgaccagt
tggcaaagcgcgcaggatgcctatgagcagcagctttatctgctcaatcagcgccagaca
ttgcagcaacaaattaccgaattacgccagcaaagcgagcagtatcaacaggccgtcgcc
aaccgtcgcgacagcctggcgtcggcccttgccacactggatttggcattgccgccggaa
ggcgaagagccgcagtggctggccgcgcgggcgcaagaagcgcaacagtggcagcaccag
cagcaacaactggccgcgctacaggaacgggtggcgttgttaacgccgattctcgataca
ctgccggaggatgacacgccagcagacgggcaaaccgtggcgttggaaggctggcgaaaa
gtgcatgatgaatgcctgtcgcttaagagccagtggcaaacgctgcaacagcaactggtg
caagagttcaacacggaaagcgcgctggaaaaacaattcaccgacgcgctggtgaacagc
gtgttcgccgatcaacaggcgtttctcagcgcgttgcttgatgatggcgaacgtttgcgc
cttgagcagttgcgccagaagctggacgccgattgccagcaaaaacaggtgctggccgcc
agtgccgagcaagctgttgccgcacatcaggcgcagcgccctgccgatctgcaagaaaat
gccacggcagaaagcgccgggctggcgctggaaaatgtgtcgcgccagttgcgtgaaaac
accacccgccagggcgaattccgccagcaactgaagcaggacgcggacaaccgcacgcgt
cagcaaacgctgttgcagcaaattgagcaagccatcgcccgctgcgatgattggggccat
ttgaatgcgctgatcggttctaaagaaggcgataaattccgtaagttcgcccagggtctg
acgctggataacttagtgtggctggcgaacaaccagttaacccgcctgcatggccgctat
ttgctgaaacgcaaagccagcgaagcgctggaactggaggtggtcgacacctggcaggcg
gatgcagtacgcgatacccgcaccctttccggtggggaaagcttccttgtcagcctcgcg
ctggcgctggcgctgtccgatctggtcagccataaaacccgcatcgattcactgttcctt
gatgaaggtttcggcacactcgacagtgaaacgctggataccgcgctggatgcccttgat
gcgctgaatgctaccggtaaaaccattggcgtgattagccatgtggaagcgatgaaagag
cgcattccggtgcagatcaaagtgaagaaaataaacggcttgggttacagcaaactcgac
gggaaatacgcggttttgtag
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