Kosakonia calanthes: AAEY27_19960
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Entry
AAEY27_19960 CDS
T10644
Symbol
mscM
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
kca Kosakonia calanthes
Brite
KEGG Orthology (KO) [BR:
kca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kca02000
]
AAEY27_19960 (mscM)
Transporters [BR:
kca02000
]
Other transporters
Pores ion channels [TC:
1
]
AAEY27_19960 (mscM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
WZV97893
LinkDB
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Position
4253611..4256943
Genome browser
AA seq
1110 aa
AA seq
DB search
MRLIIAFLMAWCLSQGAVAATAPDARQITQELEQAKAAKNTPDQAETVETLQAALNALEE
RKGSLERAQQYQQIIDNYPKLSRSLRSQLDNLRDEPQSAPAGMSSDALNQEILQVSSQLL
EKTRLAQQEQERAREISDSLSQLPQQQTDARRQVTEVERRLGAQTTNTPLAQAQNFSAQA
ESAKLKALVDELELAQLSANNRQELARMRAELAQKQSQQLDAYLQTLRNQLNSQRQREAE
QALESTELLAENSANLPAGIVEQFRINRELSQALNQQAQRMDLVASQQRQATGQTLQVRQ
ALNTLREQSQWLGASNMLGEALRAQVARLPEMPKPQQLDTEMAQLRVHRMRYEDLLNKQP
QLRQIRQADGKALTAEQNRILEAQLRTQRELLTSLLQGGDTLILELTKLKVSNSQLEDAL
KEVNEATHRYLFWTADVSPMSFAWPIEIVQDLRRLLSLDTISQLGKASAMVLTSKETLFP
LFGALILVGFSIYSRRHFTRFLERSSARVGKVTQDHFWLTMRTVFWSILVASPLPVLWAT
LGYCLQEAWPYPLAVAIGDGVTATVPLLWVVMICAAFARPTGLFVAHFGWPRNRVARGMR
YYLMSIGLIVPLIMALIMFDNLNDREFSGSLGRLCFILICGALAMVTLSLKRAGIPLYVD
KSGNSDNMPNRLLWNLMLCAPLSAILASAVGYLATAQALLARLETSVAIWFLLLVIYHII
RRWMLIQRRRLAFERARHRRAEILAQRARGEEDSAHQTSTEGTADVDEPEVDLDAISVQS
LRLVRSILMLIALLSVIVLWSEIHSAFGFLENIPLWDVTSTVQGVESLEPITLGAVLIAI
LVFIITTQLVRNLPALLELALLQHLELTPGTGYAITTITKYLLMLFGGLVGFSMIGIEWA
KLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSITKINTRATT
ISDWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTVPAPADANSEEVTQILYTAAERCS
LVIDNPAPEVFLVDLQQGLQLFELRIYAAEMGHRMPLRHEIHQLILAGFREHGIDLPFPP
FQMRLESLDGKRTARTLSSAGRNSRPAGSL
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgattatcgcttttctgatggcctggtgcctcagtcagggagccgttgccgca
acggctcccgatgcccgacaaatcacccaggaactggagcaagccaaagcggcgaaaaat
acgccggatcaggcggaaaccgtcgagacgctccaggctgcgcttaacgcgctcgaagaa
cgcaaaggttcgcttgagcgcgcccagcagtatcaacaaatcattgataactaccctaaa
ctctcccgctctctgcgctctcagctggataacctgcgcgatgaaccgcagtccgcaccg
gcaggcatgagcagcgacgcgctgaatcaagagattttgcaagtcagcagccagttgctg
gagaaaacccgcctcgcacagcaagagcaagagcgcgcgcgggaaatcagcgattcatta
agccaacttccccaacagcagaccgatgcccgccgccaggtcaccgaagtggaacgccgc
ctgggggcgcaaacgaccaatacgccgcttgctcaggcgcaaaactttagcgcgcaagcc
gaatcggcaaaattaaaagcgctggtcgatgaactggaactggcgcaattgtcggccaat
aaccgccaggaattggcacgtatgcgcgccgaactggcgcaaaaacagagccagcaactg
gatgcttatttgcagactctgcgtaatcaactcaacagccagcgccaacgcgaagcggaa
caggcgctggagagcactgagttactggcggaaaacagcgccaacttgcccgccggtatt
gtcgagcagttccgcattaaccgtgaattgtcgcaggcgctgaaccaacaagcgcagcgc
atggatttggtcgcctcccagcaacgccaggccaccggccaaaccttgcaggttcgtcag
gcgttaaatacgttgcgggagcaatctcagtggctcggtgcctccaatatgctgggcgaa
gcgctgcgcgcgcaggtcgccaggttgccggaaatgccgaagccgcagcagttagatacc
gaaatggcgcagttgcgtgttcaccgcatgcgttacgaagatctgttgaataagcaaccg
caactgcggcagattcgccaggccgacggcaaggcactgaccgccgaacaaaaccgcatt
ctggaagcgcaattacgcacgcagcgcgaattgctgacctccctgttgcagggcggcgat
acgttgatcctcgagttgaccaagctcaaagtctccaacagccaactggaggacgccctc
aaagaggtgaacgaggccacccaccgttacctgttctggacggcggatgtcagcccgatg
agcttcgcctggcctatcgaaatcgtgcaggatctgcgccgtttgctgtcgctggatacc
atcagccagttgggcaaagccagcgcaatggtgctgaccagcaaagaaactttgttcccg
ctgtttggcgcgctgattctggtgggcttcagtatttactcgcgtcgacatttcacccgc
ttccttgaacgctccagcgcgcgcgtcggtaaagtgacgcaggatcacttctggctcacc
atgcgcaccgtgttctggtcaattctcgtcgcctcgccgttgccagtgctatgggcaacg
ctggggtactgtttacaagaagcctggccctacccgctggcggtagcgattggcgatggc
gtaaccgccaccgtgccgctgctgtgggtggtgatgatttgcgccgcgtttgctcgccca
acgggcttgtttgtcgcgcacttcggctggccgcgtaaccgcgtggcgcgcgggatgcgt
tattatctgatgagcatcggattgatcgtgccgctgatcatggcgttgatcatgttcgat
aacctcaacgatcgggagttctccggatcgcttgggcggctgtgctttattctgatctgc
ggcgcgctggcgatggtgacgctgagcctgaaacgcgccggcatcccgctgtatgtcgat
aagagcggcaacagcgacaatatgcctaaccggctgttgtggaatctaatgctatgcgcg
cctctgtcggcgatcctggcgtcggcggttggttatctggccaccgcgcaagcgctgctg
gcgcgcctggaaacctccgtcgccatctggttcttgctgctggtgatctatcacatcatt
cgccgttggatgctgatccagcgccgtcgcctggcgttcgaacgcgcccgccatcgccgg
gcggagatcctcgcccaacgcgcgcgcggcgaagaagattcggcgcatcaaaccagtacc
gaaggcacggcggatgtggatgagccggaagtcgatctggatgctatcagcgttcagtct
ctgcgcctggtgcgctcgattctgatgctgatcgccttgctctcggtaattgtgctgtgg
tcggaaatccattcggcttttggcttcctggaaaatattccgctgtgggatgtcacatcc
acggtgcagggggtggaaagcctcgaaccgattaccctcggcgcggtgttgattgccatc
ctggtgtttattatcaccacacaactggtgcgtaacctcccggcgctgctggagctggca
ttattgcagcatctggagctaacgccaggcaccggttacgccattaccaccatcaccaaa
tatctgctgatgctgtttggcgggctggtgggcttctcgatgatcggtattgaatgggcc
aagttgcagtggctggtagctgcactcggcgtcgggctgggttttggtttgcaggagatc
ttcgccaactttatttccggcctgatcattttgtttgaaaaaccgattcgcattggcgat
acggtaacgatccgcgatttgaccggtagcatcaccaagatcaatacgcgcgccaccacg
atcagcgactgggatcgcaaagagatcatcgtgccgaataaggcgtttatcaccgagcag
tttatcaactggtcgctgtcggattcggtcacgcgtgtggtgctgaccgtaccggcaccg
gctgatgctaacagcgaagaggtaacacaaatcctctacaccgccgctgagcgttgttcg
ctggtgattgataacccggccccggaagtgttccttgtcgatttgcagcaaggtttgcaa
ctgtttgaattgcgcatctatgccgctgagatggggcatcgcatgccgctgcgccatgaa
atccaccagttgattctggcgggcttccgcgaacacgggatcgatttgccgttcccaccg
ttccagatgcgcctcgaaagcctcgacggtaaacgcaccgccagaacgctctcttcagca
ggcagaaacagccgcccggcgggaagtttgtag
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