Kosakonia calanthes: AAEY27_21220
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Entry
AAEY27_21220 CDS
T10644
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kca Kosakonia calanthes
Pathway
kca03420
Nucleotide excision repair
kca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AAEY27_21220 (uvrD)
03430 Mismatch repair
AAEY27_21220 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kca03400
]
AAEY27_21220 (uvrD)
Enzymes [BR:
kca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAEY27_21220 (uvrD)
DNA repair and recombination proteins [BR:
kca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAEY27_21220 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AAEY27_21220 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_22
DUF4391
Motif
Other DBs
NCBI-ProteinID:
WZV98117
UniProt:
A0ABZ3B5J1
LinkDB
All DBs
Position
complement(4539309..4541471)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAATRSNMLVLAGAGSGKTRVLVHRIAWLMTVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGIRPHHIQSFGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTEGVDGEPISLYCAFNELDEARFVVNRIKAWQDNGGQLTQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAYERVVNTPTRGIGD
RTLDVVRQASRERQLTLWQATRELLQEKALAGRAASALQRFLELIDALAQETADMPLHVQ
TDRVISDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACVEEVRLRASVSRPVSHQRMG
TPVVANDTGYKLGQRVRHAKFGEGTVVNMEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttatctgctcgacagcctcaatgacaaacagcgcgacgccgtagcggcg
acacgcagcaatatgctggtgctggcgggagcgggaagcggcaagacgcgcgtgctggtg
caccgtatcgcatggctgatgaccgtcgaaaactgctcgccatactccattatggcggtc
acctttaccaacaaagcggcggcggaaatgcgccaccgcatcggccagttaatgggcacc
acccagggcggcatgtgggtcggcactttccacgggctggcgcaccgcctgctgcgcgct
caccatatggacgccaacctgccgcaagatttccagatcctcgatagcgaagatcaactg
cgcttgttgaaacgtctgatcaaggcgatgaacctcgacgagaagcagtggccgccgcgc
caggcgatgtggtacatcaacggccaaaaagatgaaggcattcgcccgcatcatattcaa
agcttcggcaacccggtggagcaaacctggcagaaagtctaccaggcttaccaggaagcg
tgcgatcgcgcagggctggtggacttcgccgagctgctgctgcgcgcgcatgagttgtgg
ctgaacaagccgcatattttgcagcactatcgggaacgttttaccaatatcctggtggac
gaattccaggatactaacaacattcaatacgcgtggatccgcctgctggcgggcgatacc
ggcaaagtgatgatcgtcggcgacgatgatcagtcgatttacggctggcgcggtgcgcag
gtggaaaacatccaacgctttctcaaggatttccccggcgccgaaaccatccgcctggag
caaaactaccgctccaccagcaatattctgagcgccgcgaacgccctgattgagaacaac
aacgggcgtttgggtaaaaagctgtggaccgaaggtgttgatggcgaaccgatctccctt
tactgcgcctttaacgagttggatgaagcgcgctttgtggtcaaccgcattaaagcctgg
caggacaacggcgggcaactgacgcagtgcgccattctttatcgcagcaacgcccaatcg
cgtgtgctggaagaggcgttattgcaggccagcatgccgtaccgcatttatggcggcatg
cgtttcttcgaacgtcaggaaatcaaagatgcactcgcttacctgcgcctgattgccaac
cgcaatgacgatgccgcttatgagcgcgtggtgaacacgccgacgcgcggcattggcgat
cgcacattggatgtggtgcgccaggcttcccgcgaacgacagttaactctctggcaggcc
acgcgtgaattgctgcaagaaaaagcgctggcaggtcgcgcagccagtgcgctgcaacgt
ttccttgaattgattgacgcgctggcgcaagagacagccgatatgccgttgcacgtgcaa
accgaccgtgtcatcagcgattccggcttgcgcatgatgtacgagcaggagaagggcgaa
aaaggtcagacgcgaatcgagaacttagaggaactggtgaccgcgacgcgccagttcagc
tacaacgaagaagatgaagatttaatgccgttacaggcgtttctctctcacgctgcgctg
gaagcgggcgaggggcaggcggacacctggcaggatgcggtgcaattaatgacgctgcac
tcggcaaaaggcctcgaattcccgcaggtgtttattgttggcgtggaagagggcatgttc
ccgagccagatgtcgctggacgaaggcggtcgcctcgaagaagaacgccgtctggcgtat
gttggcgtgacacgtgcgatgcaaaaactgaccttaacctacgcggaaacacgccgtctg
tacggcaaagaggtttatcaccgtccgtcgcgctttatcggcgaattgccggaagcgtgt
gtggaagaggtgcgtttacgcgccagcgtcagccgcccggtcagccatcagcggatggga
acgccggtggtggcgaacgataccggttataagctcggccagcgtgtgcgccatgcgaaa
ttcggcgaaggcacggtggtgaatatggaaggaagcggcgagcatagccgcttacaagtg
gcgttccaggggcagggtatcaaatggctggtggccgcttatgcgaagcttgaaacagtc
taa
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