Kosakonia calanthes: AAEY27_21960
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Entry
AAEY27_21960 CDS
T10644
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kca Kosakonia calanthes
Pathway
kca03030
DNA replication
kca03410
Base excision repair
kca03420
Nucleotide excision repair
kca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAEY27_21960 (polA)
03410 Base excision repair
AAEY27_21960 (polA)
03420 Nucleotide excision repair
AAEY27_21960 (polA)
03440 Homologous recombination
AAEY27_21960 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kca03032
]
AAEY27_21960 (polA)
03400 DNA repair and recombination proteins [BR:
kca03400
]
AAEY27_21960 (polA)
Enzymes [BR:
kca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAEY27_21960 (polA)
DNA replication proteins [BR:
kca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AAEY27_21960 (polA)
DNA repair and recombination proteins [BR:
kca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AAEY27_21960 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAEY27_21960 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Prok-E2_E
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WZV98248
LinkDB
All DBs
Position
complement(4696860..4699646)
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSVGEPTGAMYGVLNMLRSLLLQYQPTHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREADKNGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDALYAEPDKIAGLTFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELELTCEQLEVQQPATQALIELFKKYEFKRWTADVEAGKWLQAK
GSKPGAKPQETIVVEAEPDIPAATLSAENYVTILDEETLQAWIARLKKAPLFAFDTETDS
LDNISANLVGLSFATEPGVAAYVPVAHDYLDAPDQISRDRALELLKPLLEDENAPKVGQN
LKYDRGVLENYGIELRGIAFDTMLESYTLNSVVGRHDMDTLSERWLKHKTITFEEIAGKG
KNQLTFNQIALEQAGQYAAEDADVTLQLHLAMWPELQKAAGPLNVFQNIEMPLVPVISRI
ERNGVNIDPAVLHKHSEELTLRLAELEKKAHEIADEPFNLSSPKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPKDYVIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLDSVSNEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKESQKYMDLYFERYPGVLEYMERTRAQAKENGYVETLDGRRLYLPDIKSSNAARRAGAE
RAAINAPMQGTAADIIKRAMIAVDDWLQNEKPRVRMIMQVHDELVFEVHKDDVEAVSKKI
HELMESSTKLDVPLLVEVGSGPNWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaacccactcattcttgttgacggctcgtcttacctctatcgc
gcttatcatgcgtttccacctctgaccaacagtgtcggggaacccaccggtgcaatgtac
ggcgtgttgaatatgctgcgtagtttgttattgcagtatcagccgacacatgtcgcagtg
gtgtttgacgcgaagggtaaaacgttccgtgatgagttgtttgaacattacaaatctcac
cgcccgccgatgccggatgacctgcgtgcgcaaattgagccgttacacgccatggtaaaa
gcgatggggttgccgttgctggctgtttccggtgttgaggccgatgacgtgatcggtacg
ctggcgcgtgaagcggataaaaatggtcgccctgtgctgatcagtaccggtgataaagat
atggcgcagctggtgacgccaaatatcacgctgattaataccatgaccaacaccattctt
ggcccagatgaagttgtcaccaaatatggcgtgccgccagaacttatcatcgatttcctc
gcgctgatgggtgactcctcggataacatccctggcgttccgggcgttggtgagaaaacg
gcgcaggcattgttgcagggcctcggtggtctggacgcgctgtatgctgagccggataaa
attgccgggctgactttccgtggtgccaaaaccatggcggctaagctagagcagaataaa
gaggtcgcctatctctcttatcaactggcgactatcaaaacggatgttgaactggaactg
acgtgcgagcaattggaagttcagcagcccgcaacgcaagcgttgattgagctgttcaaa
aagtacgaattcaagcgctggacggcggatgtggaagccggcaagtggctgcaagcaaaa
ggaagcaagccgggcgcgaagccgcaggaaaccatcgtggtggaagcggagcccgatatt
cctgccgccacactttctgcggaaaattacgtcactatccttgatgaagaaacgttgcaa
gcgtggatcgccaggctgaaaaaagcgccgctgtttgctttcgataccgaaacggacagc
ctggacaatatcagcgctaacctggttgggctctcctttgccacggagcctggtgtagcg
gcgtatgtgccggtggcgcatgactatcttgacgcaccagatcaaatttcccgcgatcgc
gcgcttgagttgttgaagccgctgctggaagacgaaaacgcccccaaagtggggcagaac
ctgaaatacgatcgtggtgtgctggaaaattatggtattgaactgcgcggaatcgccttc
gataccatgctggagtcctacacgctaaatagcgttgttggtcgtcacgacatggacacc
ctttcagagcgctggttgaagcacaaaaccatcacctttgaagagattgcaggcaaaggc
aaaaatcagctgacctttaaccagattgcgctggagcaggccggtcagtacgcggcggaa
gacgcggatgtcacgctgcaattgcatctggcgatgtggccagaactgcaaaaagccgca
gggccgcttaatgtgttccagaatatcgaaatgccgctggttccggtgatttcacgcatt
gaacgtaacggcgtcaatatcgatcccgccgtgctgcataaacactctgaagagttgacg
ctgcgcctggcggagctggagaaaaaagcgcacgagatcgctgacgagccttttaacctc
tcttcccccaagcaactgcaaacgatattgtttgaaaaacagggtattaaaccgctgaag
aaaacgccgggcggcgcgccgtccacgtcggaagaggtgctggaagagctggcgctggat
tacccattgccgaaagtgattctggaataccgtggattggcgaaactcaaatcaacgtat
accgacaaattgccgctgatgatcaacccgaaaactgggcgcgttcatacgtcataccat
caggcggtgacggcgaccgggcgtttgtcctccaccgatccgaacctgcaaaacattccg
gtacgtaatgaagaaggtcgccgtattcgccaggcttttatcgcgccgaaagattacgtg
attgtttctgcggattactcacaaattgaactgcgtattatggcgcacctctcgcgtgat
aaaggcctgctgacggcgtttgccgaaggcaaagacatccaccgggcgacggcggcggaa
gtttttggtttgccgctggacagtgtcagcaatgaacagcgccgcagcgcgaaggcgatt
aactttgggctgatttacggcatgagtgcgtttggcttatcgcgccagttgaatattccg
cggaaagagtcgcaaaaatatatggatctctacttcgaacgctaccctggtgtgctggag
tatatggagcggacccgcgcgcaggcgaaagaaaatggctatgttgaaacccttgatggg
cgtcgtctttatcttccggacatcaaatcaagtaacgcggccagacgcgcaggtgctgaa
cgcgcggcgatcaacgcgccaatgcaggggaccgcggcggatatcatcaaacgcgcgatg
atcgccgttgatgactggctgcaaaatgagaaacctcgcgtacgcatgatcatgcaggtg
cacgatgaactggtgttcgaagtgcataaagatgatgtcgaggcagtgtcgaaaaagatc
catgagctgatggaaagtagtacaaaactggatgtgccgttactggtagaagtcggaagt
gggccaaactgggatcaggcgcactaa
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