Kitasatospora cathayae: O1G21_13115
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Entry
O1G21_13115 CDS
T10326
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kch Kitasatospora cathayae
Pathway
kch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O1G21_13115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kch03400
]
O1G21_13115
Enzymes [BR:
kch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
O1G21_13115
DNA repair and recombination proteins [BR:
kch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O1G21_13115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
PhoH
nSTAND3
PIF1
NPHP3_N
HTH_IclR
TraI_hel_assoc_N
UvrD-helicase
AAA_16
AAA_10
DAP3
UvrD_C
DUF87
DEAD
AAA
SLFN-g3_helicase
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
WBP86690
LinkDB
All DBs
Position
complement(2961012..2963246)
Genome browser
AA seq
744 aa
AA seq
DB search
MGKQAQSGQQVPRQLAQVEGVLERITYANEETGYTVARVDTGRGGNDLLTVVGALLGAQV
GESLRLHGRWGSHPQYGRQFTVENYTTVLPATVQGIQRYLGSGLIKGIGPRFAERIVERF
GVDTLEVIENEPGRLIEVPGLGPKRTKKIAAAWEEQKAIKEVMVFLQGVGVSTSLAVRIY
KQYGDASIGVVRNEPYKLAADVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSSD
QGHCYLPEERLIADGVKLLQVDVGLVIDCLAELVAAEGVVRETVPGEAGEPITAVYLVPF
HRAEISLANQLLRLLRSDSDRLPWSADVDWPVALEWLAKRTGTQLAPEQEQSVRLALTRK
VAVLTGGPGCGKSFTVKSIVMMALAKRAKVVLAAPTGRAAKRLAELTGAEASTVHRLLEL
KPGGDAAYDRDRPLDADLVVVDEASMLDLILANKLVKAVPPGAHLLFVGDVDQLPSVGAG
EVLRDLLAEDGPIPSVRLTRIFRQAQQSGVVTNAHRINEGKPPLTEGLTDFFLFVEDDAE
RAAGLTVDVVARRIPQKFGFDPRRDVQVLAPMHRGPAGAGNLNTLLQGAVTPAREGLAER
RFGGRTFRVGDKVTQIRNNYDKGRNGVFNGTVGVVTALSPDDQRLTVLTDEDEEVSYDFD
ELDELAHAYAVTIHRSQGSEYPVVVIPVTMSAWTMLQRNLLYTAVTRARKLVVLVGSRKA
IAQAVRTVSAGRRHAALDHRLASG
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaagcaggcgcagtcggggcagcaggtgccccgccagctcgcgcaggtcgagggc
gtgctggagcggatcacctacgccaacgaggagaccggctacacggtggcccgggtggac
accgggcggggcgggaacgacctgctgacggtggtgggcgcgctgctgggggcgcaggtc
ggcgagtcgctgcgactgcacgggcggtggggctcgcatccgcagtacgggcggcagttc
acggtggagaactacaccacggtgctgccggccacggtgcagggcatccagcggtacctg
ggatcggggctgatcaaggggatcgggccgcggttcgccgagcggatcgtggagcgcttc
ggggtggacaccctggaggtgatcgagaacgagccgggccggctgatcgaggtgccgggg
ctggggccgaagcgcaccaagaagatcgccgcggcctgggaggagcagaaggccatcaag
gaggtgatggtcttcctgcagggggtcggggtgtcgacctcattggcggtgcggatctac
aagcagtacggcgacgcctcgatcggggtggtgaggaacgagccgtacaagctggcggcg
gacgtctggggcatcggcttcctgacggcggaccggatcgcccaggcggtggggatcccg
cacgacagcccggagcgggtgaaggcggggctgcagtacgcgctgtcgcagagcagcgac
caagggcactgctacctgccggaggagcggctgatcgcggacggggtcaagctgctgcag
gtggacgtcgggctggtgatcgactgtctggcggagctggtcgccgccgagggcgtggtg
cgcgagacggtgccgggggaggcgggcgagccgatcaccgcggtctacctggtgccgttc
caccgggcggagatctcgctggccaaccagctgttgcggctgctgcgttcggattccgac
cggttgccgtggtccgccgacgtggactggccggtggccttggagtggctggcgaagcgg
accgggacgcagctggcgccggagcaggagcagtcggtgcggctggcgctgacccgcaag
gtcgcggtgctgacgggtggcccgggctgcggcaagtcgttcacggtgaagtcgatcgtg
atgatggcgctggccaagcgggcgaaggtggtgctggcggcgccgaccgggcgggcggct
aagcggctggcggagctgaccggggcggaggcctcgacggtgcaccggttgctggagctg
aagccgggcggggacgccgcgtacgaccgggaccggccgctggacgcggatctggtggtg
gtggacgaggcctcgatgctggacctgatcctggcgaacaagctggtcaaggcggtgccg
ccgggggcccacctgctgttcgtgggggacgtggaccagctgccctcggtgggcgccggg
gaggtgctgcgggacctgctggcggaggacgggccgatcccgtcggtgcggctgacccgg
atcttccggcaggcgcagcagtcgggggtggtgaccaacgcgcaccggatcaacgagggg
aagccgccgctgacggaggggctgacggacttcttcctgttcgtggaggacgacgcggag
cgggcggccggtctgacggtggacgtggtggcgcgccggatcccgcagaagttcggcttc
gacccgcgccgggacgtgcaggtgctggcgccgatgcaccggggtccggccggggcgggg
aacctgaacacgctgttgcagggggcggtgacgccggcccgggaggggctggcggagcgg
cgcttcggcgggcggacgttccgggtgggggacaaggtcacccagatccgcaacaactac
gacaaggggcggaacggcgtcttcaacggcacagttggagtggtgaccgccctcagtccg
gacgaccagcggctgacggtgctcaccgacgaggacgaggaggtgtcgtacgacttcgac
gaactggacgagctggcccacgcgtacgcggtgacgatccaccgctcgcagggcagtgag
tacccggtggtggtgattccggtcactatgtccgcttggacgatgctccagcgaaacctg
ctgtacaccgctgtgaccagggcgaggaaactcgtggtgctggtcgggtcacggaaggcg
atcgcacaggccgtgaggaccgtcagtgcaggtcggcggcatgccgcgctcgatcatcga
cttgcttctggatga
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