Kitasatospora cathayae: O1G21_22670
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Entry
O1G21_22670 CDS
T10326
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kch Kitasatospora cathayae
Pathway
kch03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kch00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O1G21_22670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kch03021
]
O1G21_22670
03400 DNA repair and recombination proteins [BR:
kch03400
]
O1G21_22670
Enzymes [BR:
kch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O1G21_22670
Transcription machinery [BR:
kch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O1G21_22670
DNA repair and recombination proteins [BR:
kch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O1G21_22670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
TarH
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WBP88361
UniProt:
A0ABY7Q6Z8
LinkDB
All DBs
Position
5077106..5080999
Genome browser
AA seq
1297 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDDERRQRDLPSLEAHVSVERQQIENRRDADLEARAKKAETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQRELDRLDEVWARFKNLKVQDLEGDELL
YRELRDRFGTYFSGSMGAAALKDRLETFDLAEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNKPNGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTSDRENVKGAGR
TFSSTAEAIMAFDARELDVQAPIELRLGAGTVPPRGWTPPVDEDGQTSWFDGEPFRLTTT
LGRALFNELLPEDYPFVDYEVGKKQLSAIVNDLAERYPKVTVAATLDNLKAAGFHWSTRS
GVTVSISDVIVPPSKPQILEGFEAKAEKVQKQYERGLITNDERKQELVGIWTQATNEVAD
AMAANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLSVL
EYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLAIGSVGAD
GVLRKADDVETSVYARMLAEDITVDGKLLATANTDLGDVLIDELIRHGVSEVKTRSILTC
ESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQG
LPRVVELFEARTPKGVAPISEAAGRVRIEDTEKTRKLVVTPDDGSDEIAYPVSKRVKLLV
SEGEAVEVGQKLTMGATNPHDVLRIMGQRAVQVHLVAEVQKVYNSQGVSIHDKHIEIIIR
QMLRRVTIIESGDAELLPGELVERGRFEQENRRVVAEGGHPASGRPQLMGITKASLATES
WLSAASFQETTRVLTDAAIHAKSDPLLGLKENVILGKLIPAGTGLPRYRNIRVEPTEEAK
AAMYSAVGYDDYDLSPFGAGSGQAVPLDDYDYGPYTG
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgacgtcaacttcttcgacgagctccgcatcggcctggccaccgccgacgacatc
cgccagtggtcgcacggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
cccgaaaaggacggcctcttctgcgagaagatcttcggcccgacccgggactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgccgtgagcggatgggccacatcgagctggccgccccg
gtcacccacatctggtacttcaagggtgtgccgtcccgcctcggctacctgctcgacctg
gcgccgaaggacctcgagaaggtcatctacttcgccgcctacatgatcacctgggtcgac
gacgagcgccgccagcgcgacctgccgtccctggaggcgcacgtctcggtcgagcgccag
cagatcgagaaccgccgcgacgccgacctcgaggcccgcgccaagaaggccgagaccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggc
gccgagcgcgagatgaagcagctgcgcgaccgcgcgcagcgcgagctcgaccgcctcgac
gaggtgtgggcccgcttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgcgaccgcttcggcacctacttctccggctcgatgggcgcggcggcc
ctcaaggaccgcctcgagaccttcgacctggcggaggaggccgagcgcctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctgaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagcaacaagccgaacggcatggtcctggactgcgtcccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgaagcgcctgctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgtccggtcaccggtccgggcaaccggccgctgaag
tccctcagcgacatgctgaagggcaagcagggtcgtttccgccagaacctgctcggcaag
cgagtcgactactcggcccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgccgaaggccatggcgctcgagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgtgcccgc
ccggtcgtgtgggacgtgctcgaagaggtcatcgccgagcacccggtcctgctgaaccgt
gcgcccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgaagccggccgacggtcgccccgtcaccatgccgacccaggac
atggtgctcggtctgttcttcctgacctcggaccgcgagaacgtgaagggcgccggccgc
accttctcgtcgaccgccgaggcgatcatggccttcgacgcccgcgagctggacgtccag
gccccgatcgagctgcgcctcggcgccggcaccgtcccgccgcgcggctggaccccgccg
gtggacgaggacggccagaccagctggttcgacggcgagcccttccgcctgaccaccacc
ctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgactacgag
gtgggcaagaagcagctctccgcgatcgtcaacgacctggcggagcgctaccccaaggtc
accgtggcggcgaccctggacaacctgaaggcggccggcttccactggtcgacccgttcc
ggtgtcaccgtctcgatctcggacgtcatcgtcccgccgagcaagccccagatcctggag
ggcttcgaggcgaaggcggagaaggtccagaagcagtacgagcgcggtctgatcaccaac
gacgagcgcaagcaggagctcgtcggcatctggacccaggcgaccaacgaggtcgcggac
gccatggccgcgaacttcccgaagacgaaccccatcttcatgatggtcgactcgggtgct
cgtggaaacatgatgcagatgcgtcagatcgccggtatgcgtggtctggtgtcgaacgcc
aagaacgagaccatcccgcgacccatcaaggcgtcgttccgtgagggtctgtccgtgctg
gagtacttcatctccacccacggtgcccgtaagggtctggccgacaccgccctccgtacc
gccgactccggttacctcacccgtcgtctggtcgacgtctcccaggacgtcatcattcgc
gaggaggactgcggcaccgagcgcggcctgaagctcgcgatcggctccgtgggcgccgac
ggcgtgctgcgcaaggccgacgacgtcgagaccagcgtgtacgcccgcatgctcgccgag
gacatcaccgtcgacggcaagctgctggccaccgccaacaccgacctcggtgacgtgctg
atcgacgagctgatccgccacggcgtcagcgaggtcaagacccgctcgatcctgacctgt
gagtcggccgtcggcacctgcgccatgtgctacgggcgctcgctggccaccggcaagctg
gtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagcccggtacc
cagctgaccatgcgtaccttccacaccggtggtgtggccggtgacgacatcacccagggt
ctgccgcgtgtcgtcgagctcttcgaggcccgtacccccaagggcgtggccccgatctcg
gaggccgccggtcgcgtccgcatcgaggacaccgagaagacccgcaagctggtcgtcacg
ccggacgacggcagcgacgagatcgcctacccggtctcgaagcgcgtcaagctgctggtc
agcgagggcgaggcggtcgaggtcggccagaagctgaccatgggtgccaccaacccgcac
gacgtgctgcggatcatgggccagcgtgccgtccaggtccacctggtcgccgaggtccag
aaggtctacaactcgcagggtgtgtcgatccacgacaagcacatcgagatcatcatccgg
cagatgctccgccgcgtgacgatcatcgagtcgggcgacgccgagctgctcccgggcgag
ctcgtcgagcgcggccgcttcgagcaggagaaccgtcgtgtggtcgccgagggcggtcac
cccgcctccggccgtccgcagctgatgggtatcaccaaggcctcgctggccaccgagtcc
tggctgtcggccgcctccttccaggagacgacccgggtcctcaccgacgcggcgatccac
gccaagtcggacccgctgctgggcctcaaggagaacgtcatcctcggtaagctcatcccg
gccggtacgggtctgccccgctaccgcaacatccgggtcgagccgaccgaggaggccaag
gccgcgatgtactcggccgtcggctacgacgactacgacctgtcgcccttcggcgccggc
tccggccaggcggttccgctggacgactacgactacggcccgtacaccggctga
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