KEGG   Kitasatospora cathayae: O1G21_25325
Entry
O1G21_25325       CDS       T10326                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
kch  Kitasatospora cathayae
Pathway
kch03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    O1G21_25325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kch03019]
    O1G21_25325
Messenger RNA biogenesis [BR:kch03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     O1G21_25325
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Cuticle_1 Anti-Pycsar_Apyc1 Lactamase_B_6 YicC-like_C
Other DBs
NCBI-ProteinID: WBP88828
UniProt: A0ABY7Q7Y8
LinkDB
Position
5670604..5672289
AA seq 561 aa
MSHPHPELGAPPALKEGALRITPLGGLGEIGRNMTVFEYGDRILIVDCGVLFPEDEQPGV
DLILPDFSYIRDRLDKVDGIVLTHGHEDHIGAVPFLLRENPDIPLIGSKLTLALIEAKLA
EHRIRPYVLEVKEGQRERIGPFDCEFIAVNHSIPDALAVAVRTPAGMVVATGDFKMDQLP
LDGRLTDLPTFAKLAEEGMDLLLVDSTNAEVPGFIPHERDISAALRNVFANADRRIIVAS
FASHVHRIQQVLDAAHEYGRKVAFVGRSMVRNMGIARDLGYLKVPGNLIVDVKQLDDLPE
KEVVLICTGSQGEPMAALSRMANRDHQIRIVEGDTVVLASSLIPGNENAVYRVINGLTRW
GAKVVHKGNAKVHVSGHASAGELLYFFNICKPRNLMPVHGEWRHLRAAAELGIATGVPRN
RVVIAEDGVCVDLEKGVARIVGKVQAGYVYVDGASVGDITEASLKDRKILGEEGFISVFV
AVDSTNGKIVGGPTIQARGSGIEDNAFVPVAAKLQEALDRSASDGVLEPRQVQQLVRRTI
GKWVADNYRRRPMILPVVVEV
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgagccacccgcatcccgagctcggcgcgcccccggccctgaaggagggcgccctccgc
atcactccgctcggcggcctcggcgagatcggccgcaacatgacggtcttcgagtacggg
gaccggatcctgatcgtcgactgcggcgtcctcttccccgaggacgagcagcccggagtg
gacctgatcctcccggacttcagctacatccgggaccgcctcgacaaggtcgacggcatc
gtcctcacccacgggcacgaggaccacatcggcgccgttcccttcctcctccgggagaac
ccggacatcccgctgatcggttcgaagctcaccctcgccctgatcgaggccaagctcgcc
gagcaccggatccggccgtacgtgctggaggtgaaggagggccagcgcgagcgcatcggc
cccttcgactgcgagttcatcgcggtcaaccactccatcccggacgccctcgccgtggcc
gtccgcacccccgccggcatggtcgtggccaccggcgacttcaagatggaccagctgccg
ctggacggccgcctgaccgacctgccgaccttcgccaagctggccgaggagggcatggac
ctgctgctggtggactccaccaacgccgaggtccccggcttcatcccgcacgagcgggac
atctcggcggccctgcggaacgtcttcgccaacgccgaccggcgcatcatcgtcgcttcc
ttcgccagccacgtgcaccgcatccagcaggtgctggacgccgcccacgagtacggccgc
aaggtcgccttcgtcggccgctcgatggtccgcaacatgggcatcgcccgtgacctcggc
tacctgaaggtccccggcaacctgatcgtggacgtcaagcagctggacgacctcccggag
aaggaggtcgtgctgatctgcaccggttcgcagggcgagccgatggcggcgctgtcccgg
atggccaaccgcgaccaccagatccgcatcgtcgagggcgacaccgtcgtcctggcctcc
tcgctcatcccgggcaacgagaacgccgtctaccgcgtgatcaacggcctgacccgctgg
ggcgccaaggtcgtgcacaagggcaacgccaaggtgcacgtctccgggcacgcctcggcc
ggcgagctgctgtacttcttcaacatctgcaagccgcgcaacctgatgccggtccacggc
gagtggcgccacctgcgggccgccgccgagctgggcatcgcgaccggcgtcccgcgcaac
cgcgtggtcatcgccgaggacggcgtctgcgtcgacctggagaagggcgtcgcccggatc
gtcggcaaggtgcaggccggctacgtctacgtggacggcgcctcggtcggcgacatcaca
gaggcctcgctcaaggaccgcaagatcctcggcgaggagggcttcatctcggtcttcgtc
gcggtcgactcgaccaacggcaagatcgtcggcggcccgaccatccaggcccgcggctcc
ggcatcgaggacaacgccttcgtgccggtcgccgccaagctccaggaggccctggaccgc
tcggcgagcgacggcgtgctggagccccgccaggtgcagcagctcgtccgccggaccatt
ggcaagtgggtcgcggacaactaccgccgccggccgatgatcctgccggtcgtcgtcgag
gtctga

DBGET integrated database retrieval system