Kitasatospora cathayae: O1G21_28035
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Entry
O1G21_28035 CDS
T10326
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kch Kitasatospora cathayae
Pathway
kch03030
DNA replication
kch03430
Mismatch repair
kch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O1G21_28035 (dnaE)
03430 Mismatch repair
O1G21_28035 (dnaE)
03440 Homologous recombination
O1G21_28035 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kch03032
]
O1G21_28035 (dnaE)
03400 DNA repair and recombination proteins [BR:
kch03400
]
O1G21_28035 (dnaE)
Enzymes [BR:
kch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O1G21_28035 (dnaE)
DNA replication proteins [BR:
kch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O1G21_28035 (dnaE)
DNA repair and recombination proteins [BR:
kch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O1G21_28035 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
B1
Motif
Other DBs
NCBI-ProteinID:
WBP89314
LinkDB
All DBs
Position
6269278..6272811
Genome browser
AA seq
1177 aa
AA seq
DB search
MSDQPFAHLHVHTEYSMLDGAARLKQMFKEVERLGQTHVAMTDHGNMYGAAEFHRQATDA
GITPVIGIEAYVAPESRSNTKRILWGQPHQKKDDVSASGAYTHKTIWARNKEGLHNLFKL
TSRSYAEGWLVKWPRMDKELISELSGGLMATTGCPSGEVQTRLRLGQFDEAVKSAADYQD
IFGKENYFLELMDHGLEIEKRVRDGLLEISKKLNIPPVVTNDSHYTTEADAGAHDLLLCV
QTGKNLSDPDRFRFDGTGYYIKSAAEMYALDSSDAWQEGCRNSQLLVASRVDTEGMFKFK
NLMPRFPIPEGFESEADFFKSKVWEGMDWRFPGGYDEEHKKLAEYEMDTIIQMGFPAYFL
VVADFIMWAKSQGIAVGPGRGSAAGSLVAYAMGITDLDPIPHGLIFERFLNPERISMPDV
DIDFDERRRGDVIRYVTEKWGSDKVAMIVTYGTIKAKAAIKDSSRVLGYPYAMGDRITKA
MPPDVMGKGIPLSGITDPSHPRYGEAGEIRGLYETDPDVKKVIDTARGIEGLIRQPGVHA
AGVIMSAEPLTDHIPVWTRHTDGVTITQFDYPTCEGLGLLKMDFLGLRNLTIMDDAVKAI
EKNKGIKINLLDLPLDDKPTYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLA
LYRPGPMGVNSHTNYALRKNGQQEITPIHPELEKPLEEVLRPTYGLIVYQEQVQKAAQIL
AGYSLGQADLLRRAMGKKKKEILEAEFVPFQKGCRERGYSDEAIQAVWDVLVPFSGYAFN
KAHTAGYGLVSYWTAYLKANYPAEYMSGLLTSVKDDKDKSAVYLNECRKMGIQVLPPDVN
ESDSDFTPHGSDTVRFGLTAIRNVGGPVVESMIRTRKAKGKFASFPDFLDKVESVVCNKR
TVESLIKAGAFDSLGHTRKGLSAQFEPMIDNVVGVKRKEAEGQFDLFGGDATSDEPGFGL
DVVFSEEEWEKSFLLAQEREMLGLYVSSHPLHGIEHVLADKSDCAVADLAERPDGTIVTI
GGIISGLQRKMTKQGNAWAIATVEDLAGSIDCMFFPASYQLVSSQLVEDAVVFVRGKLDK
REDVPRLMGMELSVPDLSNAHAEAPITINIPSGKVTPPLVARLSEVLTHHKGTTEVRVRL
EGRNKTTVLRLDRHRVKSDPALFGDLKQLLGPSCLAG
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaccagccgttcgcgcatctgcacgtccacaccgagtactcgatgctggacggc
gccgcccggctgaagcagatgttcaaggaggtcgagcggctgggccagacccacgtcgcg
atgaccgaccacgggaacatgtacggcgccgccgagttccacaggcaggcgaccgacgcg
ggcatcaccccggtgatcggcatcgaggcgtacgtcgcccccgagtcgcgctcgaacacc
aagcgcatcctgtggggccagccgcaccagaagaaggacgacgtctcggcgtccggcgcg
tacacccacaagaccatctgggcccggaacaaggagggcctgcacaacctcttcaagctg
acctcgcgctcctacgccgagggctggctggtgaagtggccccggatggacaaggagctg
atctccgagctgtccggcggcctgatggccaccaccggctgcccctccggcgaggtgcag
acccggctgcgcctcggccagttcgacgaggccgtgaagtccgccgccgactaccaggac
atcttcggcaaggagaactacttcctggagctgatggaccacggcctcgagatcgagaag
cgggtccgcgacgggctgctggagatcagcaagaagctgaacatccccccggtggtcacc
aacgactcgcactacaccaccgaggccgacgccggcgcccacgacctgctgctctgcgtg
cagaccggcaagaacctctcggacccggaccgcttccgcttcgacggcaccggctactac
atcaagtcggccgccgagatgtacgcgctggactcctcggacgcctggcaggagggctgc
cgcaacagccagctgctggtcgcctcccgggtcgacaccgagggcatgttcaagttcaag
aacctgatgccccgcttccccatcccggagggcttcgagtccgaggcggacttcttcaag
tccaaggtctgggagggcatggactggcgcttcccgggcgggtacgacgaggagcacaag
aagctcgccgagtacgagatggacaccatcatccagatggggttcccggcgtacttcctc
gtggtcgccgacttcatcatgtgggccaagagccagggcatcgcggtgggcccgggccgt
ggctcggcggccggttcgctggtcgcgtacgcgatgggcatcaccgacctcgacccgatc
ccgcacggcctgatcttcgagcgcttcctcaaccccgagcgcatctcgatgcccgatgtc
gacatcgacttcgacgagcgccggcgcggtgacgtgatccgctacgtgaccgagaagtgg
ggatccgacaaggtcgccatgatcgtcacgtacggcaccatcaaggcgaaggccgccatc
aaggactcctcccgggtcctcggctacccgtacgcgatgggcgaccggatcaccaaggcg
atgccgccggacgtcatgggcaagggcatcccgctgtccggcatcacggacccgagccac
ccgcggtacggcgaggcgggcgagatccgcgggctgtacgagaccgacccggacgtcaag
aaggtcatcgacaccgcgcgcggcatcgagggcctgatccgtcagcccggcgtgcacgcg
gccggcgtcatcatgtccgccgagccgctgaccgaccacatcccggtctggacccggcac
accgacggcgtcaccatcacgcagttcgactaccccacctgtgagggcctcggcctcctc
aagatggacttcctcggcctgcgcaacctgacgatcatggacgacgccgtcaaggcgatc
gagaagaacaagggcatcaagatcaacctgcttgatctgcccctggacgacaagccgacc
tacgagctgctggcgcgtggtgacacgctgggcgtgttccagctcgacggtgggccgatg
cgctcgctgctgcggctgatgaagcccgacaacttcgaggacatctcggccgttctcgcc
ctgtaccggcccggtccgatgggcgtcaactcccatacgaactacgcgctgcgcaagaac
gggcagcaggagatcaccccgatccacccggagctggagaagcccctggaggaggtgctc
cggcccacctacggcctgatcgtgtaccaggagcaggtgcagaaggccgcgcagatcctg
gccggctactcgctcggccaggcagacctgctgcgccgcgcgatgggcaagaagaagaag
gagatcctggaggcggagttcgtccccttccagaagggctgccgcgagcgcggctactcc
gacgaggccatccaggcggtgtgggacgtcctcgtccccttctccggctacgcgttcaac
aaggcgcacaccgccgggtacgggctggtctcgtactggacggcgtacctcaaggcgaac
tacccggccgagtacatgtccggcctgctgacctcggtgaaggacgacaaggacaagtcg
gcggtctacctcaacgagtgccgcaagatgggcatccaggtgctgccgccggacgtcaac
gagtccgactccgacttcacgccgcacggcagcgacaccgtccggttcgggctcaccgcc
atccgcaacgtcggtgggccggtcgtcgagtcgatgatccggacgcgaaaggcgaagggg
aagttcgcctccttcccggacttcctggacaaggtggagtcggtggtctgcaacaagcgg
accgtcgaatcgctgatcaaggcaggggcgttcgactcgctcgggcacacccgcaagggc
ctgagcgcccagttcgagccgatgatcgacaacgtcgtcggggtgaagcggaaggaggcc
gaggggcagttcgacctcttcggcggcgacgccacctcggacgagcccggcttcgggctg
gacgtcgtcttctccgaggaggagtgggagaagtccttcctgctcgcccaggagcgggag
atgctcggcctgtacgtctcctcgcacccgctgcacggcatcgagcacgtgctcgccgac
aagtcggactgcgcggtcgccgacctcgcggaacggccggacggcacgatcgtcaccatc
ggcggcatcatctcgggcctccagcggaagatgaccaagcagggcaacgcctgggcgatc
gcgacggtggaggacctggcgggctccatcgactgcatgttcttcccggccagctaccag
ctggtctcctcccaactggtcgaggacgccgtggtgttcgtgcgcggcaagctcgacaag
cgggaggacgtgccgcggctgatgggcatggagctgtccgtcccggacctgtcgaacgcg
cacgccgaggcgccgatcaccatcaacatcccgagcgggaaggtcaccccgccgctggtg
gcccggctcagcgaggtgctgacccaccacaagggcaccaccgaggtgcgggtgcggctg
gagggccgcaacaagacgacggtgctgcggctggaccggcaccgggtgaagtcggacccg
gcgctgttcggggacctgaagcagctgctcgggccgagctgtctggccggctag
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