Kitasatospora cathayae: O1G21_35910
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Entry
O1G21_35910 CDS
T10326
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
kch Kitasatospora cathayae
Brite
KEGG Orthology (KO) [BR:
kch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kch03016
]
O1G21_35910
Enzymes [BR:
kch01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
O1G21_35910
Transfer RNA biogenesis [BR:
kch03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
O1G21_35910
Prokaryotic type
tRNA splicing ligases
O1G21_35910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WBP91873
UniProt:
A0ABY7QGJ4
LinkDB
All DBs
Position
8041942..8043309
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AA seq
455 aa
AA seq
DB search
MRVPGIVFATGALLPQAAGDRALEQVANVATLPGIVRASYAMPDVHWGYGFPIGGVAATD
VEQGGVVSPGGVGFDISCGVRLLAAGVDREELDAERLRRLMDLLDRTVPRGLGRGGLWHL
EGPEELDELLLGGARYAVEHGHGVPRDLERCEDRGVLAGAAPGEVSTRAVERGLQQVGSL
GSANHFLEVQAVDRVHDPETAAAFGLRAGQVCVMIHCGSRGLGHQICTDHVRAMDRELHR
YRIDLPDRQLACTPVDSPRGRAYLGAMTAAANYGRANRQLLSEAARRAFATALGVGLELV
YDVSHNLAKLETHEVDGAARKLCVHRKGATRALPPGDPDLPADLAGAGQPVLVPGTMGTA
SYVMVGLPDNEAFRSACHGAGRVWSRHQALRTVRGEHLKGELEARGIAVRPASMRALAEE
TPEAYKDVDAVAAVTEAAGLARQVARLVPLGVCKG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgcccggcatcgtcttcgcgaccggcgcgctgctgccgcaggccgccggggac
cgcgcgctggagcaggtcgcgaacgtggcgacgctgcccgggatcgtccgcgcctcctac
gcgatgcccgacgtgcactggggctacggcttcccgatcggcggggtcgccgccaccgac
gtcgaacagggcggggtggtctcgcccggcggggtcggcttcgacatctcctgcggggtc
cggctgctcgccgccggggtcgaccgggaggaactcgacgccgagcggctccgccgcctg
atggacctgctggaccgcaccgtcccgcgcgggctcggtcgcggcggcctgtggcacctg
gaagggccggaggagctggacgagctgctgctcggcggcgcccgctacgccgtcgaacac
ggccacggcgtgccgcgcgacctggagcgctgcgaggaccggggggtgctggccggcgcg
gcccccggcgaggtgagcacccgggccgtcgagcgcggtctgcagcaggtcggcagcctc
ggctcggccaaccacttcctggaggtgcaggccgtcgaccgggtgcacgacccggagacg
gccgccgccttcgggctgcgggcgggccaggtctgcgtcatgatccactgcggctcgcgc
ggcctcggccaccagatctgcaccgaccacgtccgcgccatggaccgcgagctgcaccgc
taccggatcgatctcccggaccgccaactcgcctgcaccccggtcgactccccgcgcggc
cgcgcctacctgggcgccatgaccgccgcggccaactacgggcgggcgaaccgacagctg
ctctccgaagccgcccgccgggccttcgccaccgccctcggcgtcgggctggagctggtc
tacgacgtctcgcacaacctcgccaagctggagacccacgaggtggacggcgcggcgcgg
aagctgtgcgtccaccgcaagggcgccacccgcgccctgccgcccggcgaccccgacctg
cccgccgacctggccggggccggtcagccggtgctggtgccggggacgatgggcaccgcc
tcgtacgtcatggtcggcctgcccgacaacgaggccttccgctccgcctgccacggcgcc
gggcgggtgtggagccgccaccaggcgctgcgcacggtgcgcggcgagcacctgaagggc
gaactggaggcgcgcggcatcgccgtccggcccgcctcgatgcgggccctggccgaggag
acgcccgaggcctacaaggacgtggacgcggtcgccgccgtcaccgaggccgccggactg
gcccggcaggtcgcccggctggtgccgctgggggtgtgcaagggttga
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