Candidatus Kinetoplastidibacterium crithidiae (ex Angomonas deanei ATCC 30255): CKCE_0052
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Entry
CKCE_0052 CDS
T02413
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
kci
Candidatus Kinetoplastidibacterium crithidiae (ex Angomonas deanei ATCC 30255)
Pathway
kci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKCE_0052 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kci03019
]
CKCE_0052 (pcnB)
Enzymes [BR:
kci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CKCE_0052 (pcnB)
Messenger RNA biogenesis [BR:
kci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CKCE_0052 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AFZ82497
LinkDB
All DBs
Position
complement(67516..68745)
Genome browser
AA seq
409 aa
AA seq
DB search
MKPKIVKQNKHNINIDNISTNAIKVCETLQKAGFVSYIVGGAIRDLIVGLKPKDFDIATN
ASPEEVRSLFRRAYIIGKRFRIVHVIMGKELIEISTFRSPPLEKDEFGRILKDNSFGSHQ
EDASRRDFTINSLYYNPMKQEIIDYYSGLKDLKYKRIRIIGNAGERYREDPVRMLRAIRL
STKINGTLEKNTNIEIDALKDLIVNIPQARLFDEIIKILTCGNSFSCLEQLHAKNILHNL
IPSLNKTFTNKKDINFLKIALNNTDYRLSTNKSISPGFLLAIILWEPTKSLWKELLSKQN
NSFLSMDQASEKILLEQSKTLKIHKRITIDAKDIWLMQAKLEAKNIKNYYKIIEHAKFRA
AFDFMQLRAESKEIDNGLSNWWVDFYKADDDLKKQMIKGKQNKKLKNKK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctaaaatagtgaaacaaaataaacacaacatcaatatagataatatatcaact
aacgccataaaggtatgtgagactctacaaaaagcagggtttgtgtcctatatagtagga
ggtgctattagagatttaattgtagggttaaagccaaaagactttgatatagcaacaaat
gctagcccggaagaagttagatcactctttagaagagcttatataattggcaagcgtttt
agaatcgtccatgtaattatggggaaagaacttatagaaatttcaacttttaggtcccct
cctttggaaaaagatgagtttggacgcatattgaaagataattccttcggttcacatcaa
gaagatgcatctagaagagactttactataaattcactgtactataatccgatgaaacaa
gaaataattgattattactctggattaaaagacttaaaatataaaagaattagaataata
ggaaatgcaggagaaagatatagagaagatcctgtaaggatgttaagagcaataagatta
tctactaaaattaatggaactctagaaaaaaatactaatattgaaatagatgcattaaaa
gatctaattgttaatatccctcaagcaagattatttgatgaaataattaaaatccttaca
tgtggaaattctttttcttgcttagaacaactacatgctaaaaacatattacataatcta
attccatcattaaataaaacattcacaaataaaaaagatataaacttcctaaaaatcgca
ttaaacaatactgattatagactttcaacaaataaaagcatcagccctggatttctatta
gctataatactatgggagccaacaaagtctttatggaaagaattactatctaagcaaaac
aattcttttttatcaatggatcaagcatcagaaaaaattcttttagaacaatcaaaaact
ctaaaaatacataaaagaattactatagatgcaaaagatatttggttaatgcaagcaaaa
ttagaagcaaaaaatataaaaaattactataaaattatcgaacatgctaaattcagagct
gcatttgatttcatgcaactaagagcagagtcaaaagagatagataatggattatcaaac
tggtgggttgatttttataaagctgatgatgatttaaaaaaacagatgattaaaggaaaa
caaaataaaaaactaaaaaacaaaaaataa
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