Candidatus Kinetoplastidibacterium crithidiae (ex Angomonas deanei ATCC 30255): CKCE_0106
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Entry
CKCE_0106 CDS
T02413
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kci
Candidatus Kinetoplastidibacterium crithidiae (ex Angomonas deanei ATCC 30255)
Pathway
kci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKCE_0106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kci03019
]
CKCE_0106
03016 Transfer RNA biogenesis [BR:
kci03016
]
CKCE_0106
Enzymes [BR:
kci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CKCE_0106
Messenger RNA biogenesis [BR:
kci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CKCE_0106
Transfer RNA biogenesis [BR:
kci03016
]
Prokaryotic type
tRNA degradation factors
CKCE_0106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
KH_KhpA-B
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AFZ82548
LinkDB
All DBs
Position
125672..127729
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AA seq
685 aa
AA seq
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MVLETGEIARQSSGAVLASMGDTVILATVVGSQEIKEGQKFFPLTVDYIEKTYAVGKIPG
GFFKREGKSSEKEILTARLIDRPLRPLFPKQFYNEVQIIIHVLSVDPEIDPDIISIIGSS
AALALSGIPFNGPIGAIRVGFIENDFVINPTKSQLEKSSLDLVLAGSSDAVLMVESTARE
LSESTMLEAIDFGHQQMQVVIDNIIELVKEAGKPEWDWKPKPCDQFLVDIINEFSNEKLV
SAYNIKEKQDRSLVLREIRLEIKNFVKDRVGNSDVIPLDSTIDDIIFNLESKIVRNRILS
GEPRIDGRNTRTVRPIDIRLGVLPRAHGSALFTRGETQALVIVTLGTKQDEQIIDSLLGE
YRDKFIFHYNMPPFATGEIGRIGIPKRREVGHGYLARRALTPMLPDPKDFHYTTRLVSEI
TESNGSSSMASVCGGSLAMMDAGVPISKHVAGVAMGLILEDDKFAILTDILGDEDHLGDM
DFKVAGTSDGITALQMDIKIQGITKDIMGIALLQAQEGRLSILEKMKKAINISREELSSY
SPKIITIKINPDKIRDVIGKGGATIRAITEETATQIDISEDGVVSVAGVDNNNVQNAYKK
ILELTADVEVGSVYEGKILRILDFGAIVQLFPGKDGLLHISEISNNRIQNISDVLSIGQR
IKVKVIESDDKGRFRLSAKAVKEDL
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtggttttagaaactggagagatagcaagacaatcttctggagcggttcttgcttctatg
ggtgatacagttattttagctacagttgtaggtagtcaagaaattaaagaaggacaaaaa
ttctttcctttaactgtagactacattgagaaaacatatgctgtaggtaaaatacctgga
ggtttttttaaaagagaaggaaaatcatctgagaaagaaatattgacagctcgtttaatt
gatagacctttaaggcctttatttcctaaacaattttataatgaagttcaaataattatt
catgtgttatctgttgatccagaaattgatcctgatatcatttctataatagggtcttct
gctgcattggctttatctggaattccatttaatggtcctattggtgcaattagggttggt
tttatagaaaatgactttgtaataaatcctacaaagagtcaattagagaaatcttcttta
gatcttgttttggcaggttcttcggacgctgttcttatggttgagtctacagctagagaa
ttatctgaatctacaatgcttgaggcaattgatttcggtcatcaacagatgcaagttgtt
atagataatataatagaactagttaaggaagctggaaagccagaatgggattggaaacca
aaaccatgtgatcagtttttagttgatataataaatgaattttctaatgagaaattagta
tctgcttataacataaaagaaaagcaagatcgttctttggttcttagagagattaggcta
gaaatcaaaaattttgttaaagatagagttggtaattctgatgtcattccattagatagt
actattgatgatattatttttaacttagaatctaaaattgttagaaataggatattgtcg
ggagagcctaggatagatggtagaaatacaagaacagtaaggcctatagatattaggctt
ggtgttttgccgagagctcacggtagtgctttgtttacaagaggtgaaactcaggcatta
gttatagttacattggggactaagcaggatgagcaaattatagattctttattaggagaa
tatagggataaatttatttttcattataatatgcctccatttgcaacaggagaaatcgga
cgcataggaattccaaaaagaagagaagtaggacatggctatttagcaagaagagcatta
acaccaatgctacctgatcctaaagattttcattatactactagattagtctctgagata
acagaatctaatggctcctcttctatggcatctgtttgtggaggatctttagcaatgatg
gatgcaggtgttccgataagtaagcatgttgcaggtgttgcaatgggtttaatactagag
gatgataaatttgctattttaactgatattctaggagatgaagatcatcttggtgatatg
gattttaaagtagcaggaacttctgatggcatcactgctttacagatggatattaagatt
caaggaataactaaagacataatggggattgctttattgcaagctcaggaaggaaggtta
tctattcttgaaaaaatgaaaaaggctataaatatttctcgtgaggaattatcttcatat
tcaccaaagataataacaatcaagattaatccagataaaatccgtgatgttattggtaaa
ggaggggctacaatcagagcaatcacagaagaaacagcaactcagattgatatctcagaa
gatggagtggtttccgttgctggtgttgataataataatgtgcaaaatgcttataagaaa
atactagagttaactgccgatgtggaggttggtagtgtatatgaaggtaaaattttgcgc
attctggattttggtgctattgttcagctttttccaggaaaggatggtcttctacatata
tctgaaatatccaataataggatacagaatataagtgatgttctatctattggacaaaga
ataaaagtcaaggtgatagaatctgatgataagggtaggtttagactttcagctaaagca
gtgaaagaagatctataa
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