Candidatus Kinetoplastidibacterium crithidiae (ex Angomonas deanei ATCC 30255): CKCE_0209
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Entry
CKCE_0209 CDS
T02413
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kci
Candidatus Kinetoplastidibacterium crithidiae (ex Angomonas deanei ATCC 30255)
Pathway
kci03030
DNA replication
kci03410
Base excision repair
kci03420
Nucleotide excision repair
kci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKCE_0209 (polA)
03410 Base excision repair
CKCE_0209 (polA)
03420 Nucleotide excision repair
CKCE_0209 (polA)
03440 Homologous recombination
CKCE_0209 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kci03032
]
CKCE_0209 (polA)
03400 DNA repair and recombination proteins [BR:
kci03400
]
CKCE_0209 (polA)
Enzymes [BR:
kci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKCE_0209 (polA)
DNA replication proteins [BR:
kci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CKCE_0209 (polA)
DNA repair and recombination proteins [BR:
kci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CKCE_0209 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKCE_0209 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
DUF5425
Motif
Other DBs
NCBI-ProteinID:
AFZ82647
LinkDB
All DBs
Position
240165..242843
Genome browser
AA seq
892 aa
AA seq
DB search
MSESLLLVDGSSYLYRAFYALPELKNSKGDHTGAIYGIVSMLRKLLSKYETNYFACIFDA
PGKNFRHDICSSYKSNRPLMPQDLINQIDKIYQIIKALGLPVFSIKGVEADDVIGTISDL
FSKKYECQVIIATGDKDLAQLVNKKVKLINTMNEEVLDESGVLKKFGVSPSLIIDYLMLI
GDSVDNIPGVAKIGPKTALKLLSEFGSVENIIASVDKITGVIGKNIRDFIPNFINTRKLI
TIKRDCNLSPYFERIEDFKKKSIDFNSLKNLYESLDFSSWLSDLESKDNLSGSSLKNTDV
ELKKCIVDSENNLSLLLEELHKSKIVTIDLYGSNTSLLQTICFLVNSVVYYIPLYNLASD
SINRDDVISRLKFFLEDPNKYKVTYDLKKVLHLLFKEKINLKGVIDDVMLAAYVVDSRNN
DNLYKLVDNFLNYKCITYDEVFGKGSKLKLIEEVSIEVIIDFFSQRVLSISQLHSLFNNK
LSQDSKLKDIYDIEKKIAIILQVMETNGVKIDHLNLQNQSNFLEKKIINLENEIYLLSGC
KFNINSPKQLGEVLFQFVGLPIIRKTSAGLPSTDEGVLSKLAKDFKLARLVLDYRTLTKL
KSTYTDKLPKMINIETGRLHTTYSQVSVITGRLSSFDPNLQNIPVRTEEGKLIREAFIAE
NNNILISADYSQIELRVMAHVSKDYNLQLAFQEGKDVHIFTASEIFGISVDNVSEEQRRI
AKTINFGLIYGMSAFGLASNLNIDRVSAQNYINRYFDRYPGVLNYINLIKEKYNDLGYVE
TVFGRRLYISSLSNKSFSNRQATDRAAINAPIQGTAADLIKKAMISVQDWISSENLNSKL
VMQVHDELVLEVVDSEFLIVKDMLPTLMCKVAEFNVPLIVDLGVGYNWSEAH
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatctttattattggttgatggttctagttacttatatagggctttttatgct
ttacctgaattaaaaaattctaaaggagatcatacaggagctatatatgggatagtgagc
atgctaagaaagttgctttcaaaatatgaaaccaattattttgcttgtatttttgatgcc
ccagggaaaaattttaggcatgatatatgtagttcgtataaatcaaatcgtccattaatg
cctcaagatttaataaatcaaatagataagatttatcaaattattaaagctctaggatta
cctgtttttagtataaaaggagttgaggctgatgatgttattggtacaatatcggattta
ttctctaaaaagtatgaatgtcaagttattattgctactggtgataaagatttagctcaa
ttagtaaataagaaagtaaaattaattaatacaatgaatgaagaggttttagatgaatct
ggtgttttaaaaaaatttggtgtaagtccttctttgattatagattatttaatgttaata
ggcgattccgttgataatatacctggagtagcaaaaataggtccaaaaactgcattaaaa
ttattatcagaatttggctctgttgaaaatattattgcttctgttgataaaattacaggt
gttattggtaagaatattagagattttatccctaattttattaataccagaaaactaatt
acaataaaacgtgattgtaatttatctccttattttgaaagaatagaagattttaaaaaa
aaatctatagattttaattctttaaaaaatttatatgagagtcttgatttttcttcttgg
ttatctgatctggaatccaaagataatctatcaggtagttctttaaaaaatacagacgtc
gaactaaaaaaatgtatagtggattctgaaaataatttatctttgctattagaagaatta
cataaatcaaaaattgttactattgatctttatggtagtaatacatcattattgcaaaca
atatgttttttagttaactcagtagtttattatataccactatataatttagcatcagat
tctataaatagagatgatgttatatcaagattaaaattttttttagaagatcctaacaaa
tataaagtaacatatgatttgaaaaaagtattacatcttttatttaaagaaaagataaat
ctaaaaggtgtaatagatgatgttatgttagcagcttatgtcgtagattcacgtaataat
gataatttatataaattggtagataactttttaaattataaatgtattacttatgatgag
gtatttggtaaaggttcaaaattaaaattaatagaagaagtttcaatagaggttattatt
gattttttttctcaaagggttctttctattagtcagttacattctttatttaataataag
ctatctcaagattcaaaactaaaagatatttatgatatagagaaaaaaatagctatcatt
ttgcaagttatggaaaccaatggtgtaaagatagatcatttgaatttgcaaaaccaaagt
aattttttagaaaagaaaatcataaatttggaaaacgaaatatatttattatctggatgt
aagtttaatattaactctcctaaacaattaggtgaggtactttttcaatttgttggtctt
cctattattcgtaagacaagtgctgggttaccttctacagatgagggtgttcttagtaaa
cttgcaaaagattttaaactggctagattagttttagattaccgtactcttactaaatta
aaatctacgtatacagataagctaccaaaaatgataaatatagaaactggtaggttacat
actacttattctcaagtttctgtgattacaggtagattgtcttcctttgatcctaattta
cagaatattcctgttcgtacagaagagggcaaattaattagagaagcttttatagctgaa
aataataatatattaatttcagctgattactcccaaatagaacttagagtaatggctcat
gtttcaaaagattataatctgcaactggcttttcaagaaggtaaagatgttcatatattt
acagcatctgagatatttggtatttctgttgataatgtttctgaagaacaaagaagaata
gctaaaactattaattttggattaatttatggtatgagtgcttttggtcttgcatctaat
ctaaatattgatcgtgtatcagcacagaattatattaatagatattttgaccgttatcct
ggagtattaaattatattaatttaattaaagaaaaatataatgacttgggatatgtagaa
actgtatttggaagaagattatatatttcatctttatctaataaatcttttagtaacaga
caagctacagatagagcagctatcaatgcccctatacagggtacagcagcagatttaatc
aagaaagctatgatttcagtccaagattggatatccagtgagaatttaaattctaaatta
gttatgcaggtgcatgatgaattggttttagaagttgtggactcagaatttttaattgtg
aaagatatgttgcctactttgatgtgtaaagttgctgaatttaatgttcctttaatagtt
gatttaggtgttggttataattggtcagaagctcactaa
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