Candidatus Kinetoplastidibacterium crithidiae (ex Angomonas deanei ATCC 30255): CKCE_0611
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Entry
CKCE_0611 CDS
T02413
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
kci
Candidatus Kinetoplastidibacterium crithidiae (ex Angomonas deanei ATCC 30255)
Brite
KEGG Orthology (KO) [BR:
kci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kci03032
]
CKCE_0611 (gyrB)
03400 DNA repair and recombination proteins [BR:
kci03400
]
CKCE_0611 (gyrB)
Enzymes [BR:
kci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CKCE_0611 (gyrB)
DNA replication proteins [BR:
kci03032
]
Prokaryotic type
DNA Topoisomerases
CKCE_0611 (gyrB)
DNA repair and recombination proteins [BR:
kci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CKCE_0611 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AFZ83030
LinkDB
All DBs
Position
635460..637919
Genome browser
AA seq
819 aa
AA seq
DB search
MSKIKNAHLSENDTSYSASSIKVLKGLDAVRKRPGMYIGDTSDGTGLHHMVFEVVDNSID
EALAGYCNEIVVTIHPDNSISVSDNGRGIPTGIHQDDEFHRTAAEIVMTELHAGGKFDQN
SYKVSGGLHGVGVSCVNALSVWLKLTICRDKSIHQIEFEKGICTKPLSVIGHTDKSGTEV
HFLADAEIFSNIEFHNEILSRRLRELSFLNNGVKIKLVDLIKNKNENFEFSGGAKGFVGY
INRNKTVIHNGIFSAVSESSAGGVPVVVEVAMQWNDSYSENVLCFTNNIPQRDGGSHLTG
LKAAMTRVLNKYITDNELAKKAKVDTVGDDMREGLVCILSIKVPEPKFSSQTKDKLVSSE
VRPAVEDVISKTLESWLLENPNEAKAICGKIIEASRAREAARKAREMTRRKGILEGSGLP
GKLADCQERDPSLSELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDRLLNS
EQITTLITALGTSIGPDFNIEKLRYHRLIIMTDADVDGAHIRTLLLTFLYRQMPELLNRG
YIYIAQPPLYKVKVGREEFYLKDDEEESKFILNLAIKNASVFTGENSDPIEGENLLKLAN
KYYKSEKIIKRLSRTFDTNVLNAIVDGIDLNFDSEEAAIISLNNLSEKLKSIMSSNNSIS
IKVISVDENSYGLEISRNSYGNEKSCLLNQDFLRSNDYIVMKNTFYEFNNLLSDEAIVVR
GIGDKRKEEKISDFREAIKWLIKEAEQSISKQRYKGLGEMNPDQLWATTMNPQARRLLRV
RIEDAIVADQVFSTLMGDEVAPRREFIEENALYANNVDF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaataaaaaacgctcatttatcagagaatgatacaagctatagtgctagttca
ataaaagtattaaaagggttagatgctgttagaaaaagaccaggaatgtatataggtgat
acttctgatggcactggactacatcatatggtttttgaggtagttgataattctatagat
gaagctcttgcaggttattgcaatgaaattgttgtaacaattcatcctgataattctata
tcagtatctgataatggtcgtggtattcctacaggaattcatcaggatgatgaattccat
cgtactgcagcagaaatagtgatgactgaattacatgcaggaggtaaatttgatcagaat
tcttataaagtatctggtggattgcatggagtaggagtttcttgtgtaaatgcattgtct
gtttggttaaaattgacaatatgcagggataaatctatacatcaaatagaatttgaaaaa
ggtatttgtactaagcctcttagtgtgattgggcatactgataaaagtggtaccgaggtg
cattttttagctgatgcagaaattttttctaatatagaatttcataatgaaattctatct
agaagattgagagaattgtcttttttaaataatggtgtcaagatcaaattggtagatttg
attaaaaataaaaatgagaattttgagttttctggaggagcaaaaggttttgttggttat
ataaatcgtaacaaaactgtcattcataatggtatttttagtgctgtatcagagtcgtct
gctggaggtgttcctgttgttgttgaagtagctatgcaatggaatgattcttattcagag
aatgttttatgttttactaataatattccccaaagagatggaggatcacatttaactggt
ctgaaagctgctatgactagggtattgaataaatacataactgataatgaattagcaaag
aaggctaaggtagatactgttggtgatgatatgcgtgagggtttggtatgtatattatcg
ataaaagttccagagccaaaattcagtagtcaaacaaaggataaacttgtttctagtgaa
gtaagaccagcagttgaagatgttatttctaaaacattagaatcatggcttttggaaaat
cctaatgaagcaaaagcaatttgtggaaaaattatagaagcatcaagagctagagaagca
gctcgtaaagcacgtgaaatgacaagacgtaagggtattttggaaggtagtggtcttcca
ggaaaattggctgattgtcaagaacgagacccttctttgtcagagttatatattgtagaa
ggagactctgctggaggatctgcaaaacaaggtagagatagaaaatttcaagcaattttg
ccattaagaggtaaggttctaaatgtagaaaaagcaaggtttgataggttgttaaatagt
gagcaaataacaactttgattactgccctgggcacaagtataggtccagattttaatata
gaaaaacttagatatcatagacttattattatgactgatgctgatgttgatggtgcacat
attcgtacattactattaacatttttgtatagacagatgccagagttattaaatagagga
tacatatatatagcacagcctcctttatataaagttaaggtaggcagggaagaattttac
ttgaaagatgatgaagaagaatcaaaatttatattgaatttagctattaaaaatgcttca
gtttttacaggagaaaattctgacccgattgaaggagaaaacctattaaaattagcaaat
aaatattataaatcagaaaaaataattaaacgtttatcaagaacttttgatactaatgta
ttgaatgctatagttgatggaattgacttaaattttgatagtgaagaagcagctattatt
tctttaaataatttgtcagagaaattgaagagcataatgtcatcgaataatagtatatct
ataaaagttattagtgttgatgaaaatagctatggtcttgaaatttcaagaaactcatat
ggtaatgaaaaaagttgtttattaaatcaagattttcttagaagtaatgattacatagtt
atgaaaaatactttttatgaattcaataatcttttaagtgatgaggccattgttgtaaga
ggtattggagataaaagaaaagaagagaagatatctgattttagagaagctattaagtgg
ttgataaaagaagcggaacaatcaatatcaaaacaacggtataaaggtttgggtgaaatg
aatcctgatcagctttgggcaacaactatgaatccacaagcgcgtagattgctaagagtt
cgtatagaagatgcaattgttgctgatcaagtttttagcactctgatgggtgatgaagtt
gctcctcgtcgagaatttatagaagaaaatgcactttatgctaataatgttgatttttag
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