Kitasatospora camelliae: ABWK59_23570
Help
Entry
ABWK59_23570 CDS
T11032
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
kcm Kitasatospora camelliae
Brite
KEGG Orthology (KO) [BR:
kcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kcm03016
]
ABWK59_23570
Enzymes [BR:
kcm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ABWK59_23570
Transfer RNA biogenesis [BR:
kcm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ABWK59_23570
Prokaryotic type
tRNA splicing ligases
ABWK59_23570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
XCM81666
UniProt:
A0AAU8K0D7
LinkDB
All DBs
Position
unmamed1:5240859..5242052
Genome browser
AA seq
397 aa
AA seq
DB search
MSYTEVPGIRVPIRMWTDPATVEGQAMQQLRNISSLPWLHGLAVMPDVHLGKGATVGSVI
AMKGAVCPAAVGVDIGCGMTAVKTSLTAADLPDDLSRLRSKIEQAIPVGRGLHSEPVGPG
KLHGLSTAGFGGLWERFDGIASEVLWKRERAAQQMGTLGGGNHFIELCVDEAGAVWLMLH
SGSRNIGKELAEHHMGVARSLPHNQGLVDRDLAVFIADTPQMAAYRQDLFWAQEYAKYNR
AMMMTLLQDVVRREFPKARVGFDEMISCHHNYVAEERYEGVDVLVTRKGAIRAGSGEYGI
IPGSMGTGSYIVRGLGNAAAFNSASHGAGRKMSRTAAKKRFTTRDLVEQTQGVECRKDAG
VVDEIPGAYKSIEKVMDQQRDLVEVVAHLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaccgaagtacccggcatccgcgtccccatccggatgtggaccgacccggcc
accgtcgagggccaggccatgcagcagctgcgcaacatcagctcgctcccgtggctgcac
ggcctcgccgtgatgcccgacgtccacctgggcaagggcgccaccgtcggctccgtcatc
gccatgaagggcgccgtctgccccgcggcggtcggcgtggacatcggctgcggaatgacc
gccgtcaagacctcgctcaccgcggccgacctgcccgacgacctgtcgcggctgcgctcc
aagatcgagcaggccatcccggtcggccgaggcctgcactccgagccggtcggcccgggg
aagctgcacggcctctcgacggcgggcttcggcgggctctgggagcgcttcgacggcatc
gcgtccgaggtgctctggaagcgtgagcgggcggcgcagcagatgggaaccctcggcggc
ggtaatcatttcatcgagttgtgtgttgatgaggccggcgctgtgtggctgatgctgcac
tccggttcgcgcaacatcggcaaggaactggccgagcaccacatgggcgtggcccgctcg
ctcccgcacaaccaggggctggtcgaccgcgacctcgcggtgttcatcgcggacaccccg
cagatggcggcctaccgccaggacctgttctgggcgcaggagtacgccaagtacaaccgg
gcgatgatgatgacgctcctgcaggacgtcgtgcggcgggagttccccaaggcgagggtc
ggcttcgacgagatgatcagctgccaccacaactacgtggcggaggagcgctacgagggc
gtcgacgtgctggtgacccgcaagggcgcgatccgggctggctcgggcgagtacggcatc
atcccgggctcgatgggcaccggttcgtacatcgtccgcggtctgggcaacgccgcggcg
ttcaactcggcgtcgcacggcgccggccggaagatgagccgcacggcggcgaagaagcgg
ttcaccacccgggacctcgtcgagcagacccagggcgtggagtgccgcaaggacgcgggc
gtggtcgacgagatcccgggcgcgtacaagtcgatcgagaaggtcatggaccagcagcgc
gacctggtcgaggtggtcgcccacctcaagcaggtcgtctgcgtgaagggctga
DBGET
integrated database retrieval system
