Kosakonia cowanii: BWI95_07215
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Entry
BWI95_07215 CDS
T04691
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kco
Kosakonia cowanii
Pathway
kco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWI95_07215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kco03019
]
BWI95_07215
03009 Ribosome biogenesis [BR:
kco03009
]
BWI95_07215
Enzymes [BR:
kco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BWI95_07215
Messenger RNA biogenesis [BR:
kco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BWI95_07215
Ribosome biogenesis [BR:
kco03009
]
Prokaryotic type
rRNA helicases
BWI95_07215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
APZ04865
UniProt:
A0A807LHB6
LinkDB
All DBs
Position
complement(1564497..1566401)
Genome browser
AA seq
634 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF
SLPLLHNIDPDLRAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGTRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSSEEEMDI
ETLAAALLKMAQGERPLILPPDAPMRPKREFRERDERFERRGDRNDRNDRGPRTERAGED
RPRRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIELP
KGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRERSERRPGGGERRSFGGGERREGGRGPR
RDGAAPAGAGRFGGERRENRGPRREEGTTRRRDA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctcggttacgaaaaaccatctccgatccaggctgagtgcattccgcacctg
ctgaacggtcgtgacgtgctgggcatggcccagactggtagcgggaaaaccgcagcgttt
tctcttccgctgcttcataacatcgatccggacctgcgtgcgccgcagatcctcgtgctt
gctccgacccgcgaactggcggttcaggtagctgaagcgatgaccgatttctctaaacac
atgcatggcgtgaacgtggttgctctttatggcggccagcgttatgacgtgcaattacgc
gccctgcgtcagggcccgcagatcgttgtcggtacgccgggacgtctgctggatcacctg
aaacgcggcaccctggacctctccaaattgagcggtctggtgctggatgaagccgacgaa
atgctgcgcatgggctttatcgaagacgtagaaactatcatggcgcagatcccggaaggt
catcagaccgctctgttctccgccaccatgccggaagcgattcgtcgcattacccgccgc
tttatgaaagagccgcaggaagtgcgcattcagtccagcgtgacaactcgcccggacatc
agccagagctactggtctgtctacggcatgcgtaaaaacgaagcgctggttcgcttcctt
gaagcagaagattttgatgcagcgatcatcttcgtgcgcaccaaaaacgcgaccctggaa
gtggctgaagcgctggagcgcaacggttacaacagcgccgcgctgaacggtgacatgaac
caggccctgcgtgagcagactctggagcgtctgaaagatggtcgtctggacatcctgatt
gcaaccgacgttgcggcccgtggtctggacgttgagcgcatcagcctggttgttaactat
gacatcccgatggactccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgcgctctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatc
gaacgtacgatgaagctgaccattccggaagtagagctgccgaacgcagaactgctgggc
acacgccgtctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgatctg
gaccagtaccgtgcgctgctggcgaaaatccagccctcttctgaagaagagatggatatc
gaaacgctggctgccgcactgctgaaaatggcacagggcgaacgtccgctgatcctgccg
ccggatgcaccgatgcgtcctaagcgtgagttccgcgagcgtgatgagcgtttcgaacgc
cgcggcgatcgtaacgaccgcaatgaccgtggtccgcgtaccgaacgtgccggtgaagac
cgtccgcgtcgtgagcgtcgcgatgttggtgatatggaactgtaccgtattgaagtgggc
cgtgatgacggtgtcgaagttcgtcatatcgttggtgcaatcgccaacgaaggcgacatc
agcagccgctacatcggcaacatcaagctgttcggttctcactccaccattgagctgccg
aaaggcatgccgggcgaggttctgcagcactttacccgcacgcgtattctcaacaaaccg
atgaatatgcaactgctgggcgatgcacagccgcgtgagcgcagcgaacgccgtcctggc
ggcggtgagcgtcgtagcttcggcggcggcgagcgtcgtgaaggtggccgcggtccgcgt
cgtgatggtgcagcacctgctggtgcaggccgtttcggcggtgaacgtcgtgaaaatcgt
ggcccgcgccgcgaagaaggcacaacccgtcgtcgtgacgcgtaa
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