Kosakonia cowanii: BWI95_07610
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Entry
BWI95_07610 CDS
T04691
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
kco
Kosakonia cowanii
Brite
KEGG Orthology (KO) [BR:
kco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kco03019
]
BWI95_07610
Messenger RNA biogenesis [BR:
kco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BWI95_07610
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
ERMP1-TM
Motif
Other DBs
NCBI-ProteinID:
APZ04933
UniProt:
A0A807LFA1
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Position
complement(1646839..1648782)
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AA seq
647 aa
AA seq
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MRLTTKFSAFVTLLTGLAIFVTLIGCSLSFYNAIQDKVANRVQAVAAVIDTRLISTPLPR
LSTQLDEMMVPVDITSIAIKQGRHTLLSHTRKGNYRPAGSNYAMREIEMPSMKIPGVTFT
LVYQDPMANYFRSMMTTAPLTVAIGFMIVIIFLAVRWLRRQLSGQELLELRATRILNGER
GAQVRGSIYEWPSRTSSALDVLLTDIQFASDQRSRMDTLIRSYAAQDTRTGLNNRLFFDN
QLATLLEDQEKVGSHGVVMMIRLPDFDLLRDSDGLASAAEEYLFTLINLLSTFIMRYPGA
LLARYHRSDFAVLLPHRTLKEAESIAGQILKAVDGLPPTKMLTREDIMHIGICSWRGGQS
TRQVMEHAEAAARNAVLQGTNSWSVYDDSLPEQGRGNVRWRTLIEQMLNRGGPRVYQKPA
VNRDGQVHHRELMCRIFDGEQEVIAEEYMQMVLQFGLSEEYDRLQITRLMPFLGYWPEEN
LAIEVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIFELAEADVCQHISRLQSVVRLINGL
GARVAVVQAGLTLVSTSWIKALDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTRTR
VFATGVRTRGEWQMLVERGVAGGQGDFFAASQPLDTNVKKYSQRYSV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaatttagtgcttttgtaacacttctgaccgggctggcgattttc
gtcacgctcattggctgctcactcagcttttataacgccatacaagataaagtcgccaac
cgcgtacaggccgttgctgctgttatcgatacccgcctgatctccacgccgcttccgcgc
ctctcaacgcagcttgatgagatgatggtgccggtcgatatcacctcgattgccatcaag
cagggccgccatacccttttaagccatacgcgcaaagggaattatcgcccggcgggcagt
aactacgcgatgcgcgagattgagatgccgtcgatgaagatccccggcgtgacctttacg
ctggtctatcaggatccgatggccaactacttccgctccatgatgaccaccgcgccgctg
acagtggcgattggttttatgatagtcattattttcctcgcggtgcgctggctgcgacgc
caactctccggccaggagctgctggaactgcgggcgacgcgcatccttaacggtgagcgc
ggcgcacaggtgcgcggcagcatctatgagtggccgtcgcgcaccagcagcgcgctggac
gtcttactcaccgatattcagtttgccagcgatcagcgcagccgcatggatacgctaatc
cgctcttacgcggcgcaggacacgcgtaccggcctcaataaccgcctctttttcgataat
caactggcaacactattagaagatcaggaaaaagttggctcgcacggcgtggtgatgatg
atccgcctgcccgattttgacctgctgcgcgacagcgacgggcttgcctctgccgccgaa
gagtatctctttaccctcatcaacttactttccacctttattatgcgttaccccggcgcg
ctgctggcgcgctatcaccgcagtgattttgcggtactgcttccgcaccgcacattaaaa
gaagcggagagtatcgccgggcagatcctgaaagcggtggatggtttaccgccgaccaag
atgttgacccgggaagacattatgcatatcggcatctgcagctggcgcggcgggcagtcg
acaagacaagtgatggagcacgcggaggcggcggcacgcaacgcggtgctgcagggcacc
aacagctggtcagtctatgacgactcgttaccggagcaggggcgcggcaatgtgcgctgg
cgcacgctgattgagcagatgctgaatcgcggggggccgcgcgtctaccagaaaccggcg
gttaaccgcgacgggcaagtgcaccaccgggagctaatgtgccgcattttcgacggcgag
caggaggtgatcgctgaagagtatatgcagatggtgctgcaatttggcctgtcagaggag
tacgaccggctgcagatcacgcgcttaatgccgttcctcggctactggccggaggagaac
ctcgccattgaggtcaccgtcgagtcgctgatccgcccgcgtttccagcgctggctgcgc
gataccttgatgcaatgcgaaaaatcgcaacgcaaacggattatttttgaacttgcagag
gccgatgtgtgtcaacacatcagccgattgcagtcggtcgtgcgattgatcaatggatta
ggcgcgcgcgtggcggtggttcaggcgggtctgacgttggtcagcaccagttggatcaaa
gctctggatgtcgagttactgaagctgcatccggggttggtcaggaacattgagaagcgc
accgaaaaccagctgctggtacagagccttgttgaagcgtgtaaaggcacacgaacccgc
gtctttgcgaccggcgttcgcacgcgcggcgaatggcagatgctggtggagcgaggcgtt
gcgggcggacagggcgatttcttcgcggcgtctcagccgctcgacaccaatgtgaaaaaa
tattcacaaagatactcggtttga
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