Kosakonia cowanii: BWI95_08400
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Entry
BWI95_08400 CDS
T04691
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kco
Kosakonia cowanii
Pathway
kco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BWI95_08400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kco03400
]
BWI95_08400
Enzymes [BR:
kco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BWI95_08400
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BWI95_08400
DNA repair and recombination proteins [BR:
kco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BWI95_08400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
APZ05073
UniProt:
A0A807LFP8
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All DBs
Position
1808522..1809331
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRWPVSEEIHSLSDKPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILPHELPAQKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
EGHNVLAHLGPEPLSDAFNADYLREKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASTLSQQDYELLVRVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRE
GQPCRICGTPIVAAKHAQRSTFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagttgaaaccagccgcagaggcattgaaccgcacctggtcggt
gaaaccatcctgcatgcggtggtacgtaacggccgcttacgctggcctgtttccgaagag
atccacagcctgagcgacaaaccggtgctcagcgtgcagcgacgcgctaaatacctgctg
ctcgagctgccggatggctggatcatcattcacctcggtatgtccggcagtctgcgtatt
cttccccacgaactccccgcccaaaaacatgaccatgtcgatctggtgatgagcaacggc
aaagtgctgcgttacaccgatccgcgtcgttttggcgcctggctgtggaccaaagagctg
gaaggacataacgtgctggcgcatctcggcccggagccgctgagcgatgcgtttaatgcc
gactatctgcgggagaagtgcgcgaagaagaaaacagcgatcaaaccctggctgatggat
aacaagctggtggtgggcgtcgggaatatttatgccagcgaatcgctgtttgccgccggg
atccatcccgatcggctcgcttcaaccctctcgcagcaggattacgaactgctggtgcgc
gtgatcaaagcggtgctgttacgctccattgagcagggcgggacaacgctgaaagacttc
ctgcaaagcgacggcaaaccgggttacttcgcacaggagttgcaggtttacgggcgagaa
gggcagccgtgtcgcatctgcggtacgccaatcgtggcggcaaaacatgcgcagcgctcg
acgttctactgtcgtcagtgccagaaatag
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