Kosakonia cowanii: BWI95_12765
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Entry
BWI95_12765 CDS
T04691
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kco
Kosakonia cowanii
Pathway
kco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWI95_12765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kco03019
]
BWI95_12765
Enzymes [BR:
kco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BWI95_12765
Messenger RNA biogenesis [BR:
kco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BWI95_12765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
APZ05850
UniProt:
A0A807LIH1
LinkDB
All DBs
Position
2702660..2704090
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AA seq
476 aa
AA seq
DB search
MSFDALGLNPDILRAVAEQGYLEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QRLVQSQPHAKGRRPVRALILTPTRELAAQVGENVQEYSQYLNIRSMVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNALKLDSVEILVLDEADRMLDMGFIHDIRRVLSKLPAK
RQNLLFSATFSDEIKQLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGITSAAIHGNKSQGARTRALADFKSGSIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRVAVAGYEPDPSIKAEPIQNGRGQNGGRQGGGGRGQGGGGGRSQSAPRRSE
GETPKARHPRRSNDGAAAKSEGGAAKPVGNRRLDGGAAKPANNGARRRRPRKPASA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgatgcccttggcctgaatccggatatcctgcgcgcagttgcggagcagggt
tacctcgagccgacccctattcaacagcaggcgatccctgcggtgctgcaaggccgcgat
ctgatggccagcgcccagaccggtaccggtaaaaccgccggttttacactgccgctgttg
caacgcctggtgcagagccagcctcacgcgaaaggccgccgtccggtacgcgccctgatc
ctgaccccaacccgtgaactcgcggcgcaggtcggtgagaacgtgcaggagtatagccag
tatctcaatattcgttcgatggtcgtcttcggcggcgtcagcattaacccgcagatgatg
aaactgcgtggcggcgttgacatcctggtggctaccccgggccgtctgctcgatctcgaa
caccaaaacgccctgaagctcgacagcgtggaaattctcgtgctggatgaagctgaccgt
atgctggatatgggctttatccacgatattcgccgcgtgctgtcgaagctgccggcgaag
cgtcagaacctgctcttctccgcgaccttctcggatgagatcaaacagctggcggaaaaa
ctgctgcacaacccgctggaaatcgaagtcgcacgccgtaacaccgcttccgagcaggtg
acgcagcacgttcactttgtggataagaaacgcaagcgggaactgctgtcgcagatgatt
ggcgaaggtaactggcagcaggtgctggtctttacccgtaccaagcatggcgccaaccac
ctggccgagcagctgaataaagatggcatcaccagtgcggcgatccacggtaataagagc
cagggcgcacgtacccgcgcgctggcagactttaaatccggttcgattcgcgtgctggtg
gcaacagatatcgccgcgcgcggcctggatatcgaagagctgccgcatgtcgtcaactat
gagttgccgaacgtgccggaagattacgtacaccgcatcggccgtaccggccgtgctgcc
gccaccggcgaagcgctgtcgctggtctgtgtcgatgagcataaactgctgcgcgacatt
gagcgtctgctgaaaaaagagatcccgcgtgttgcggttgcaggctatgagccggatccg
tcaattaaagcggagccgatccagaatggccgtggtcagaacggtggccgtcagggcggc
ggtggacgcgggcagggcggtggcggcggtcgcagccagtccgcaccgcgccgtagtgaa
ggcgaaacgccgaaagcgcgtcatccgcgtcgtagcaacgacggcgcagccgcgaaatcg
gaaggtggagccgcgaagcccgtgggcaatcgccgtcttgatggcggtgcagcgaaaccg
gcaaacaacggcgcacgccgtcgtcgtccgcgtaaacccgcttccgcgtaa
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