Kosakonia cowanii: BWI95_14215
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Entry
BWI95_14215 CDS
T04691
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
kco
Kosakonia cowanii
Pathway
kco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWI95_14215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kco03019
]
BWI95_14215
03009 Ribosome biogenesis [BR:
kco03009
]
BWI95_14215
Enzymes [BR:
kco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BWI95_14215
Messenger RNA biogenesis [BR:
kco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BWI95_14215
Ribosome biogenesis [BR:
kco03009
]
Prokaryotic type
rRNA processing factors
BWI95_14215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PNPase_C
S1
Motif
Other DBs
NCBI-ProteinID:
APZ06118
UniProt:
A0A807LJ98
LinkDB
All DBs
Position
complement(3024054..3027305)
Genome browser
AA seq
1083 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPANYNAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALSSLELPDGMGLIVRTAGVGKSAEAL
QWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTIRDNESLS
LSILRLIEEEALKENTQEVHAIVPVPVASYLLNEKRAAVSAIEARQGGVRCVIVPNDQME
TPHYSVLRVRKGEETPTLSYLLPKLHEEEMALPSEEEYAERKLPEQPALATFVMPDVPPA
PQAQEPAPTAQAQPAATTTAAPGLFGRIVSALKNLFAGEEAPAPVEVKEEKKEAKPERSQ
ERRKPRQSNRRDRNDRRDSRDSRSEGNEGREGRDNRDNRDNREGRENREGREDNRRNRRE
KPQQNAENREPRQNTVVDESDKAKTRDEQQPSRRERNRRRGDDKRQAQQEVKELNREELT
REEQPAQEAEQEERVQVMPRRKQRQLSQKVRIDDNRAETVIDETVAETAPEEQHTQLAKV
DLPAVVENAPVLEQEENGEARENTMPRRSRRSPRHLRVSGQRRRRYRDERYPVQSAMPLT
IACASPEMASGKVWVRYPVPRAQDEQQEIQHNSALETEQQHAAEHEVAPAVAEAQLVTAA
PAEVVEPQAPVEAAPVSEQPEVVEPQAAVAEPAPVEVETTHPEAISAPVDEQPQLIAEED
RSVAEQVAEEAEPVKEEAAPAPVVEDVAPAKVEAPVQAEAPAPVKVEAPVAVKAETAAPV
KADAPVVATAPMTKAPAPAYVQEAPRHSDWVRPAFNFDGKGSAGGHSATHTATAPATKPP
AVE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaacgcaactcagcaagaagagttgcgtgtcgcacttgttgat
gggcaacgtctgtacgacctggatatcgaaagccccgggcatgaacagaaaaaagccaat
atctacaaaggtaaaatcacccgcattgaaccgagccttgaagctgccttcgttgactac
ggcgctgaacgtcacggtttcctccccctcaaagagatcgctcgcgaatacttccccgcc
aactacaacgcgcatggccgtccgaacatcaaagatgtgctgcgtgaaggccaggaagtt
atcgtccagatcgacaaagaagagcgcggcaacaaaggcgcggcgctgaccacctttatc
agcctcgccggtagctacctcgttctgatgccgaacaacccgcgcgcgggcggcatctct
cgccgtatcgaaggcgatgaccgtaccgagctaaaagaggcgctgtctagcctcgaactg
ccggacggcatgggtcttatcgtgcgtaccgcaggcgttggcaaatctgccgaagcgctg
cagtgggatctcagcttccgcctgaaacactgggaagcgattcagaaagccgcagagagc
cgcccggctccgttcctgattcaccaggagagcaacgttatcgttcgcgctttccgtgac
tatctgcgccaggacattggcgaaatcctgattgataacccgaaagtgctggagctggct
cgccagcatatcgccgcgctgggtcgtccggatttcagcagcaaaattaagctctacacc
ggtgaaatcccgctgttcagccactatcagattgagtcgcaaatcgaatccgccttccag
cgtgaagtgcgtctgccgtccggcggctcgattgttatcgacagcaccgaagcgctgacc
gccatcgacatcaactccgctcgcgcaacccgcggtggcgacattgaagagacggcgttc
aacaccaacctcgaagcggcagatgagatcgcccgtcagctgcgtctgcgcgacctcggc
ggcctgatcgttatcgactttatcgacatgaccccggttcgccaccagcgcgcggttgaa
aaccgtctgcgtgaagcggtacgtcaggatcgtgcacgtatccagatcagccatatctcc
cgcttcggcctgctagagatgtcccgccagcgtctgagcccgtcgctgggtgaatcgagc
caccacgtctgcccgcgctgtagcggtacaggtaccatccgtgacaacgaatccctgtcg
ctctctattctgcgtctgattgaagaagaagcgctgaaagagaacacccaggaagtgcac
gccattgtgccggttcctgttgcctcttacctgctgaacgaaaaacgtgccgccgtcagc
gctatcgaagcccgtcagggcggcgtacgctgcgtcatcgtgccgaacgatcagatggaa
acgccgcactactcggtgctgcgcgtacgtaaaggtgaagagacgccaaccctcagctac
ctgctgccgaagctgcatgaagaggagatggcgctgccgtctgaagaggagtatgccgag
cgtaaactgcctgagcagcctgccctcgccacctttgtgatgccagacgtgccgcctgcg
ccgcaagcccaggagcccgcgcctacagcccaggcacagcctgccgctaccactaccgca
gcacctggtctgtttggccgcatcgtctctgccctgaaaaacctgtttgctggcgaagaa
gcgcctgcgccggttgaagtgaaggaagagaagaaagaggcgaaacctgagcgttcgcag
gagcgtcgtaaaccgcgtcaaagcaaccgtcgcgaccgtaacgatcgccgcgattcgcgt
gattcccgtagcgaaggcaacgagggtcgtgaaggacgtgacaaccgcgacaatcgtgat
aaccgcgaaggtcgtgagaaccgtgaaggtcgcgaagataaccgccgcaaccgtcgtgaa
aaaccgcagcagaacgcggagaatcgcgagccgcgccagaacaccgtcgttgacgagtcg
gataaagcgaaaacccgcgacgagcagcagccgtcacgccgtgaacgcaaccgccgccgt
ggtgatgataaacgtcaggcgcagcaggaagttaaagaactgaaccgtgaagagctgacc
cgcgaagagcagcctgctcaggaagcggagcaggaagagcgtgttcaggtgatgccgcgc
cgcaaacagcgccagctgagccagaaagtgcgcatcgatgataaccgtgctgaaaccgtt
atcgacgaaaccgtcgcagagaccgcgccagaggagcagcatactcagctcgcgaaagtc
gatctgccggctgtggttgaaaacgccccggtgctggagcaggaagagaacggtgaagcg
cgtgaaaacaccatgccgcgccgctcacgccgctccccgcgtcacctgcgtgtcagcggt
caacgccgccgtcgataccgtgacgagcgctacccggtacagtccgccatgccgctgact
atcgcctgcgcctcaccggagatggcttccggtaaagtgtgggttcgctatccggtgccg
cgtgcgcaggacgagcagcaggagatccagcacaacagcgcgctggaaaccgagcagcag
catgcagcagagcatgaagttgccccagccgtagctgaagcgcagctggtcaccgccgcg
ccggctgaggttgttgagccgcaggcaccggttgaagccgcacctgtcagcgagcagcca
gaagtggttgaaccgcaggcagcggttgcagagccagctccggtcgaggttgaaacgacc
catccggaagcgatctctgccccggtagacgagcagccgcagctgattgctgaggaagat
cgttctgtcgcagagcaggttgccgaagaggccgagccagtgaaagaagaggctgcgcct
gcaccggttgttgaagacgttgctccggcaaaagttgaagcgccagtgcaagctgaagcc
cctgctccggtgaaagttgaagcccctgtagcggtgaaagctgaaacagctgcgccggtg
aaagccgacgcgccggtggttgcaaccgcgccaatgactaaagcgcctgcccctgcgtat
gtacaggaagcaccgcgccacagcgactgggttcgcccggcgttcaacttcgacggtaaa
ggttctgcgggcggtcacagcgccacgcataccgccaccgcgccggcgaccaaaccgcca
gcggttgagtaa
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