Kosakonia cowanii: BWI95_22895
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Entry
BWI95_22895 CDS
T04691
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kco
Kosakonia cowanii
Pathway
kco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWI95_22895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kco03021
]
BWI95_22895
03019 Messenger RNA biogenesis [BR:
kco03019
]
BWI95_22895
Transcription machinery [BR:
kco03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BWI95_22895
Messenger RNA biogenesis [BR:
kco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BWI95_22895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
APZ07894
UniProt:
A0A830ZF04
LinkDB
All DBs
Position
p888-76-2:complement(67063..68322)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagcttatcactctcggcgaaaat
atggggctggaaaacctggcccgtatgcgcaaacaggacatcatttttgccatcctgaag
cagcacgcaaagagtggcgaagacatcttcggcgacggtgtgctggagattctgcaggat
ggatttggtttcctccgttccgcagacagctcctaccttgccggccccgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcaccggtgacaccatttcaggtaag
attcgcccacctaaagaaggtgaacgttactttgcactgctgaaagttaacgaggtgaac
tacgataaaccggaaaatgcgcgcaataagattctgttcgagaacttaacgccgctgcat
gcgaactctcgtctgcgtatggaacgtggtaacggctctactgaagatttaaccgcccgc
gttctcgatctggcttcgccgatcggtcgtggtcagcgtggtctgattgtggcaccgccg
aaagccggtaaaaccatgctgctgcagaatatcgcgcagagcatcgcttacaaccatcct
gactgcgtgctgatggtgctgctgattgatgaacgtccggaagaagtgacggaaatgcag
cgcctggtgaaaggtgaagtggttgcgtcaaccttcgacgaaccggcctcccgccatgtg
caggttgctgaaatggttatcgaaaaagcgaaacgcctggttgagcataagaaagatgtc
attatccttctcgactccattacccgtctggcgcgtgcttataacaccgttgttccggct
tccggtaaagtgttgaccggtggtgtggatgcgaacgccctgcaccgtccgaagcgtttt
ttcggtgctgcgcgtaacgtggaagagggcggtagcctgaccattatcgcgacggcgctg
atcgataccggttcgaagatggatgaagtgatttacgaagagtttaaaggcaccggtaac
atggagctgcacctctcacgtaaaatcgcagaaaaacgcgtcttcccggcgattgattac
aaccgctccggtacccgtaaagaagagctgctcaccacacaggaagagctgcagaaaatg
tggatcctgcgcaaaatcattcacccgatgggtgagatcgatgcgatggaattcctcatc
aacaagctggctatgacgaagacgaatgatgagttcttcgacatgatgaagcgctcttaa
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