Candidatus Korarchaeum cryptofilum: Kcr_0122
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Entry
Kcr_0122 CDS
T00668
Name
(GenBank) RNA-binding protein-like protein
KO
K07573
exosome complex component CSL4
Organism
kcr
Candidatus Korarchaeum cryptofilum
Pathway
kcr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kcr_0122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kcr03019
]
Kcr_0122
Messenger RNA biogenesis [BR:
kcr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Kcr_0122
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Kcr_0122
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ECR1_N
ECR1_N_2
FtrD-like
zf-C2HC5
Motif
Other DBs
NCBI-ProteinID:
ACB06882
UniProt:
B1L7Q5
LinkDB
All DBs
Position
125697..126302
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AA seq
201 aa
AA seq
DB search
MREIVVPGERIGVVEEYVGAEGIFEIKGVLYSSHLGLLEKKDLEVNVKPIKRPILPVKPG
EIALGEIRSADRSSFNLFLTLLLRPRVSILIPPVHANMPKRGSNIGARPSDIVIVRVESV
ENGIVTVTMEGAHELGVIRSICESCGSVLDRGVGYTLICRRCGKIYLDKRLSSKYGWNPF
KEGLLNVRGGKENPGPFDRKI
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgagggagattgtcgtccctggagagaggataggtgtcgttgaggaatatgtgggggcc
gaggggatattcgagattaagggtgtgctctactcctctcacctcggcctcttggagaag
aaggatctggaggtcaatgttaagcctatcaagagacctatattaccagttaaacccgga
gaaatcgctctaggggagataaggagcgctgataggagcagcttcaacctcttccttact
ttgctcctgagacccagagtgagcattctaatacctccagttcacgctaacatgcccaag
aggggctcaaatataggagctaggccgagcgatatcgtaatagtcagggtggagagcgtt
gaaaacggtatcgtcacggtgacgatggagggagcccatgagctaggtgtgatcaggagc
atatgcgagtcttgcggatccgtgctcgataggggtgtcggatatactttaatatgtagg
agatgcggtaagatataccttgataagaggctgagcagtaagtacgggtggaaccccttc
aaggaagggttgttgaatgttaggggaggaaaagagaaccctggtcctttcgatagaaaa
atctga
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