Candidatus Korarchaeum cryptofilum: Kcr_0229
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Entry
Kcr_0229 CDS
T00668
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
kcr
Candidatus Korarchaeum cryptofilum
Pathway
kcr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
kcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Kcr_0229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kcr03019
]
Kcr_0229
03009 Ribosome biogenesis [BR:
kcr03009
]
Kcr_0229
04131 Membrane trafficking [BR:
kcr04131
]
Kcr_0229
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kcr04147
]
Kcr_0229
Messenger RNA biogenesis [BR:
kcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Kcr_0229
Ribosome biogenesis [BR:
kcr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Kcr_0229
Membrane trafficking [BR:
kcr04131
]
SNARE
SNARE associated proteins
Others
Kcr_0229
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Kcr_0229
Exosome [BR:
kcr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Kcr_0229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_14
AAA_22
TIP49
AAA_5
AAA_33
AAA_28
nSTAND3
IstB_IS21
RNA_helicase
Mg_chelatase
ABC_tran
DUF815
Sigma54_activat
NPHP3_N
AAA_24
AAA_7
ATPase
AAA_18
ATPase_2
AAA_lid_PRS2_C
Parvo_NS1
AAA_17
Zeta_toxin
NB-ARC
ATP-synt_ab
TsaE
AAA_19
PhoH
AAA_3
SLFN-g3_helicase
Form-deh_trans
Motif
Other DBs
NCBI-ProteinID:
ACB06989
UniProt:
B1L3G0
LinkDB
All DBs
Position
227020..229218
Genome browser
AA seq
732 aa
AA seq
DB search
MSEKKVETLTVAEAHPKDVGRGIARLDPRVMEALGINTGDVVMIEGSKVTAAIAWPSYSS
DYGKNLIRIDGYTRRNAGAAIDDTVKVWKGVAKPAKKVVFAPTEPIQLLGGEQYLKRLLE
GRPLVRGDRVTINVFGSLIELVVTAVNPVADAVIVSADTEIEISEKPVTEERKVPRVTYE
DIGGLKDAIQKIREMVELPLRHPELFRHLGIDPPKGVLLYGPPGTGKTLLAKAVANESNA
HFISISGPEIMSKYYGESEKRLREIFEEAEKNAPSIIFMDEIDAIAPKREEVTGEVERRV
VAQLLALMDGLKGRGEVIVIGATNRPEAIDPALRRPGRFDREIEIGVPDREGRKEILLIH
TRNMPLADDVDLDRLADITHGFVGADLAALVREAAMRALRRLMKEVNLLESEKLPPEVLE
KLKVTMDDFMEAFKDITPSALREVVVQVPNVRWDDIGGLDEVKEELKMAVEWPLKYPELF
EASGARQPKGILLFGPPGTGKTLLAKAVANESEANFISVKGPEIMSKWVGESEKAIRMIF
RRARQTAPTIIFFDEIDSIAPIRGYSSDSGVTERVISQLLTEMDGLEELRKVVVIAATNR
PDLIDPALLRPGRFDRLIYVPPPDFAARLQILKIHTKGKPLAPDVNLEELASKTEGYTGA
DLANLVNIATLMALKEHINKYKDPKEASAHRSELIITKRHFEEAMKKIRPLGKEEIERYK
RIADEFLRRAST
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaagaaagtcgagactctcactgttgccgaagcccatcccaaagatgtggga
aggggaatagctagactcgatcctagggtgatggaagctctcgggataaacacaggagat
gtggtgatgatagagggatcaaaggtaactgcagctatagcatggccatcctactcctcg
gattacggtaagaacttgataaggatagatggctacactaggaggaacgccggagcagct
atagatgatactgtcaaggtttggaagggcgtagctaaacccgcgaagaaggtagtgttc
gcacctaccgaacccatacagttgctaggaggggagcagtacctcaagaggctgctagag
gggaggcctctggttagaggggatagagtcacgataaacgtcttcggaagcctgatagaa
ttggtggtcacggctgtcaatcccgtagcagatgcagtcattgtgagcgcggatactgag
attgagataagcgagaagcccgtcaccgaggagaggaaggtcccaagggtcacttacgag
gacataggtggcttgaaggatgccatccaaaagataagggagatggtagagcttcctctt
aggcatcctgagttattcaggcacttgggaatagatccacctaagggagtattgctctac
ggtcctcccgggaccggcaaaactctgctggctaaggctgtggctaacgagagcaacgcc
cacttcataagtatctcaggccccgagataatgagcaagtactatggtgagagcgagaag
aggctcagggagatattcgaggaggctgagaagaatgctccatctataatattcatggac
gaaatcgacgctattgcccctaagagagaggaagttacaggtgaggttgagaggagagta
gtggctcagctattggctttgatggatggattgaaggggaggggcgaagtcatagtaata
ggagctactaacaggcctgaagccatagatccggctttgaggaggcccgggaggttcgac
agggagatagagataggagtgcccgatagggaggggaggaaggagatactgctgatacac
acgaggaacatgcccctagctgatgatgtggatctcgatagattggccgatataactcac
ggcttcgtgggagctgatctagctgctttggtaagggaggcagctatgagggctctgagg
agattgatgaaggaagttaatctgcttgagagtgagaagctgccaccggaagtcttggag
aagcttaaggtcactatggacgatttcatggaggccttcaaggatataacgccctcagct
ctgagggaggtagtcgtccaagtcccgaacgtgagatgggatgacataggcgggctcgat
gaagtgaaggaagagctgaagatggcagtagaatggcccctcaaatatcctgagctcttc
gaggctagcggtgcgaggcagcctaaggggatactgctcttcggccctccaggaactggc
aaaactctgctagctaaagctgtagcgaatgagagcgaggccaacttcataagcgtcaaa
gggccagagataatgagcaagtgggttggggagagcgagaaagctattaggatgatattc
aggagggcaaggcagaccgctccaactataatattcttcgatgagatagattcgatagcg
ccgataaggggatactcaagcgactcgggagtcacggagagggtcataagtcagctgctc
actgagatggatggcttagaggagctcaggaaggtagtagtcatagctgctactaacagg
ccggatttaatagacccagctttgctgaggccaggaaggttcgataggctgatctacgtc
cctccacccgacttcgccgctagactgcagatactcaagatacatacgaaggggaagccc
ctagctccggatgtgaacctcgaggaactcgcatctaagacagaaggatatacaggcgct
gacttagcgaatttagtgaatatagccactctaatggctttgaaggagcacataaataag
tacaaggatcccaaggaggcctcagcccatagatcggagctcatcataacgaagaggcac
tttgaggaagctatgaagaagatcagaccactagggaaggaggagatcgagagatataag
agaatagctgatgaattcttgagaagagcttcgacatga
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