Candidatus Kinetoplastidibacterium crithidiae TCC036E: CDEE_0052
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Entry
CDEE_0052 CDS
T02464
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kct
Candidatus Kinetoplastidibacterium crithidiae TCC036E
Brite
KEGG Orthology (KO) [BR:
kct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kct03016
]
CDEE_0052
Enzymes [BR:
kct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CDEE_0052
Transfer RNA biogenesis [BR:
kct03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CDEE_0052
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
DUF4934
Motif
Other DBs
NCBI-ProteinID:
AGF47900
UniProt:
M1M738
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All DBs
Position
696160..698046
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AA seq
628 aa
AA seq
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MYVLYEDSGCLKTGAIISKTESNMLVETEHGKKIKLKTHSCLLQFNDPSPSKLINEATII
ASTIDINFLWECASQDVFYAYELSAEYFGHDPSAIEQTAMLLKLHNSPIYFYKKGSGQYK
SATKDKLLLAIAAIEKKKAQEEEEKKLVESLINGELPYIIKANALDLIIKPDKNTIYWKA
LEKACVILNKSPEKLLLELEAWPNLLTLLRKKFIKSNFPNGIDFQDNISANIIDDLPISD
AEIYSIDDISTTEIDDGISVRKIDKDLTKVGIHIASPALGIQHGSILDQIARSRSSTIYL
PGEKITMLPQKVIEEFSLQSGKLSPAISLYVTLDNNGTIVKSESLIEKVKVKENLRITDI
ENIFTESNLNNSDIDIPFSEWIRPLWKITQILSLKREQRRGYPENLSRPEYNFRIHGNTD
DPNSVVIIEKRPRNNPVSKIVAEFMILANSIWANLLKEYGVAGIYRSQQTFGRVRMSTIP
LPHEYIGVDQYIWSTSPLRRYIDLVNQWQIISIIKHSVSARLASPFKAKDSNLFSIIQEF
EFKYNVICSFQNEIENFWSIQWLIQKKLEIINGYIIKENLVKIDEVPIIITVDNLPKLEK
GTHIKIRIISINSSTLEIKTQYIETIDL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgctttatgaagatagtggctgtctaaaaactggtgccataatatctaaaaca
gagtctaatatgctagtagaaacagagcatgggaaaaaaattaaactcaaaacccacagc
tgtttgttacaatttaatgacccttcacctagcaaattgataaacgaagctactattata
gctagtactatagatataaattttctgtgggaatgcgcatcgcaagatgtgttttatgca
tatgaattatcagctgaatattttggccatgatcctagtgctattgagcaaacagctatg
ctacttaaactacataattcccctatttatttttacaaaaaaggaagtggtcaatataaa
tcagcaactaaagacaaactcttacttgctatagcagccatagaaaagaaaaaagcacaa
gaagaagaggaaaaaaaactagtagaatcgcttattaatggagaattaccttacataata
aaggcaaatgctcttgatttaattataaaacctgataaaaacactatctactggaaagct
ctagaaaaagcctgtgtcattttaaataaaagcccagaaaaattattgctagagttagaa
gcctggcctaatttattaaccttattaagaaaaaaattcataaaaagcaattttccaaat
ggcattgattttcaagacaatatttccgcaaacattattgatgacttgccaatatcagac
gctgaaatctactctatagatgatataagcactacagaaatagatgatggaatatcagtt
aggaaaatagataaggatcttacgaaagtaggcatacatatagcatctcctgccttaggt
atacaacacggaagcatattagatcaaattgcaagatcacgttcttctacaatttatttg
cctggagaaaaaataactatgttaccacagaaagtaatagaagaattttcattacaatct
ggtaagttgtcaccggctatatctctatatgttacattagataataatggaacaattgta
aaatcagagtcattaatagaaaaagttaaggttaaagaaaatttacgaattactgacata
gaaaacatatttacagaatctaatcttaataattcagatatagatattccattttctgag
tggataaggccattatggaaaataacacaaattttatctctaaaaagagaacaaagaaga
ggctatccagaaaacttatctcgtccagaatataattttcgtatacatggcaatactgat
gatccaaactctgtagttataatagaaaaaaggccaagaaataatcctgttagtaaaatt
gttgctgaatttatgattttagctaatagcatatgggctaacttattaaaagaatatggc
gtagctggaatatataggtctcaacaaacgtttggaagagtaagaatgagcacgatccca
ttacctcatgaatatattggggttgatcaatatatttggagcacttcccctctaagaaga
tatatagatttagttaaccaatggcagattatatcaataataaaacatagtgtatcggca
cgactagcatctccttttaaagctaaggatagtaatttattttctataattcaagaattt
gaatttaaatacaatgtaatttgttcatttcaaaatgaaattgaaaacttctggtcgata
caatggttaatacagaaaaaactagaaataataaatggatacataataaaagaaaaccta
gtcaaaatagatgaagtccctatcattataacagttgataaccttccaaaactagaaaaa
ggaacacatataaaaatcagaattatatcaatcaattcctctacactagagataaaaact
caatatatagagactatagatttgtga
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