Candidatus Kinetoplastidibacterium crithidiae TCC036E: CDEE_0328
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Entry
CDEE_0328 CDS
T02464
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
kct
Candidatus Kinetoplastidibacterium crithidiae TCC036E
Pathway
kct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDEE_0328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kct03019
]
CDEE_0328
03110 Chaperones and folding catalysts [BR:
kct03110
]
CDEE_0328
03029 Mitochondrial biogenesis [BR:
kct03029
]
CDEE_0328
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kct04147
]
CDEE_0328
Enzymes [BR:
kct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CDEE_0328
Messenger RNA biogenesis [BR:
kct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CDEE_0328
Chaperones and folding catalysts [BR:
kct03110
]
Heat shock proteins
HSP60 / Chaperonin
CDEE_0328
Mitochondrial biogenesis [BR:
kct03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CDEE_0328
Exosome [BR:
kct04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CDEE_0328
Exosomal proteins of other body fluids (saliva and urine)
CDEE_0328
Exosomal proteins of breast cancer cells
CDEE_0328
Exosomal proteins of colorectal cancer cells
CDEE_0328
Exosomal proteins of bladder cancer cells
CDEE_0328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
AGF47401
UniProt:
M1LTH4
LinkDB
All DBs
Position
complement(109063..110721)
Genome browser
AA seq
552 aa
AA seq
DB search
MTAKQVLFGDDARVRIVRGVNTLANAVKTTLGPKGRNVVIERSFGAPTVTKDGVSVAKEI
ELKDKIENIGAQLVKDVASKTSDSAGDGTTTATVLAQSIVQEGLKYVASGFNPIDLKRGI
DKAVAAAVEELKKQSKPITTNKEIAQVGSISANSDSSIGDIIAKAMDKVGKEGVITVEDG
KSLENELDVVEGMQFDRGYLSPYFINNPEKQVSALDEPYILIYDKKISNIRDLLPLLEQV
AKSSKPLLILAEDVEGEALATLVVNNIRGILKTTAVKAPGFGDRRKAMLEDIAILTGGVV
ISEETGMTLEKATLNDLGQAKRVEIGKENTTIIDGAGDTKSIEARVKQIRVQIEESTSDY
DREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALL
RAKQAISKLKGDTPDQNAGIQLILRAVEEPLRTIVSNAGEEASIVVNNVLNGKGSYGYNA
ATGEYTDLVAQGVLDPTKVTRTALQNAASVASLLLTAEAAIAELPEDKPSAPSMPGGMGG
MGGMGGMGGMDF
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaaacaagttttatttggtgatgatgctcgggtacgaattgtacgcggtgtc
aatactcttgctaatgctgtaaaaacaactttaggtcctaagggaagaaatgttgtaatt
gaacgctcatttggagcacctactgtcaccaaagatggtgtgtcggttgctaaagaaata
gaactaaaagacaagatagaaaatataggagctcaacttgtaaaagatgttgcttcaaaa
acctctgatagtgctggagatggaacaactactgctacagttcttgctcaatccatagta
caagaaggtctaaaatatgttgcttctggatttaaccctattgatctaaaaagaggaata
gataaagcagtagctgcagcagtagaggaattaaaaaaacaatcaaaacctattactaca
aataaagaaattgcacaagtaggatccatatctgccaatagtgatagttctataggcgat
ataatagcaaaagctatggataaagtaggtaaagaaggtgtaataacagtagaagatggt
aaatcattagaaaatgagctggacgttgtagaagggatgcaattcgataggggctattta
tctccttattttattaacaatccagaaaaacaagtatccgctttagatgaaccatatatt
ctcatatatgacaaaaaaattagcaatattagagatttactaccattgctagaacaagta
gcaaaatccagcaagcccttactaattctagcagaagatgttgaaggagaagctttagct
actttagtagtgaacaatattagaggaatactaaaaacaactgctgttaaagctcctggt
tttggtgatcgcagaaaagctatgctggaagacattgcaattcttacaggtggcgtagtt
atatctgaagaaactggaatgactctagaaaaagctacgcttaatgatcttggccaagct
aaaagagttgagataggaaaagaaaacactaccattatagatggagcaggcgacactaaa
tctatcgaagctcgagtcaaacaaattagagttcaaatagaagagtcaacatcggattat
gatagagaaaaacttcaagaacgtgtagcaaaattggctggtggagtggctgtaatacgt
gttggagctgcaacagaagttgaaatgaaagagaagaaagctcgcgtagaagatgccttg
catgctactcgcgctgcagttgaagaaggtgttgttgccggaggtggagttgcattactt
cgtgctaaacaagctatttctaaacttaaaggagatactccagaccaaaatgctggcata
cagttgatcctaagagcagtagaagaacctttacgtactatcgtctccaatgcaggagaa
gaagcaagtattgtagtaaataacgttctaaatggtaaaggtagttatggatataatgca
gctactggtgagtataccgatctagttgcacaaggagttcttgatcctactaaagttact
agaactgccttacaaaatgctgcctctgtagcaagcttgttattgacagcagaagctgca
atagcagaattaccagaagacaaaccttcagcaccatctatgcctggtggtatgggtggt
atgggtggtatgggcggtatgggtggtatggatttctaa
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