Candidatus Kinetoplastidibacterium crithidiae TCC036E: CDEE_0433
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Entry
CDEE_0433 CDS
T02464
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kct
Candidatus Kinetoplastidibacterium crithidiae TCC036E
Pathway
kct03030
DNA replication
kct03430
Mismatch repair
kct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDEE_0433
03430 Mismatch repair
CDEE_0433
03440 Homologous recombination
CDEE_0433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kct03032
]
CDEE_0433
03400 DNA repair and recombination proteins [BR:
kct03400
]
CDEE_0433
Enzymes [BR:
kct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDEE_0433
DNA replication proteins [BR:
kct03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDEE_0433
DNA repair and recombination proteins [BR:
kct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDEE_0433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AGF47487
UniProt:
M1LP81
LinkDB
All DBs
Position
219863..223357
Genome browser
AA seq
1164 aa
AA seq
DB search
MLTSNTLPSFINLRVHSEFSVADGLIRVNDLVDNVIKLQQPAVALTDMSNLFGILKFYKY
ARSRGIKPIIGCDLWLSNDEDLDNPFRILILVCNEVGYLNLCEIITKSYLINQRNNRPEI
RKEWLFSKKGLIVLSGGINGDVGYALKRGKIDVALSLAREWNEMFPESYYLEIQRAGFDG
EENYIQAVLSIAIETNIPVVATHPVQFLKKEHFQAHEIRVCISEGKHLTDIHRKHNFTKE
QYLVSSEEMTRLFADIPSALSNTIEIAKRCNLVLKTGQAMLPKFDVDEEISLGDYLRKLS
NKGLLNKINNLYPDSEELFKSKYYERLEQECKIIIQMGFAGYFLIVQDFINWGKNNGVPV
GPGRGSGAGSLVAYALGITDLDPIKYDLLFERFLNPERVSMPDFDIDFCQDNRDRVIDYV
KNKYGTESVSQIATFGTFGAKAVIRDVGRVLGLPYSLCDSLSKLVPFSPVEQWTLEKVLN
SDPVFKSRYEQEEEVKLLIDLARHLEGLVRNIGMHAGGVLIAPGKLTDFCPLYCQPGQEN
TLVSQFDKDDVELAGLVKFDFLGLRNLTVLDWTVRYIKLSSKENEFFDLSSLSLEDEETF
KLLCSGNTTAVFQLESKGMKELLKKLQPSTFEDIIAVLALYRPGPLESGMVNDFVNRKHG
LSNINYFHPVLESILKSTYGVIVYQEQVMLISQVIGGYSLGSADLLRRAMGKKDPDEMSK
HRVLFEKGAISNGYSSQLAIKLFDLMEKFAGYGFNKSHSAAYALIAYQTAWLKAHYCAEF
FASAMSSDMDDTDKIQILFNDAKYNNIKILPPDINLSNFRFEPVISEVNDRKSHEIRYGL
GAIKGTGKIVIEEIVKIRNQDGPFKSIFDFCFRVSKLVNRRTIESLIKSGSFDSIELNRA
YLLSSLDKVIDSVEQKQRDIYQTSLFGNNEESCFLGSSVADEVAVSWNLHKTLIEEKSAL
GYCFSGHLFSCWEDEIRKLFPKKLIDVDHNNKPQWICGVLVRMRSLFTRRGKILLIMLDD
GSKQLEVVVYNELYTEIKNYLKEDNLLIVKGMVSKDDYSGNLRIISEQIHDLQFIRQTMA
KCLRLHIKNSKFSLSSLKDILQKFKNYSDVGSSSVPLFILYKNEDKNFFCKIKLDDKWNI
IITNELILELQKLMRDNGSIDIGY
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgttaacttcaaatactcttccgtcttttattaatttgcgtgttcattcagagttttct
gtagctgatggattaataagagttaacgatcttgtagataatgttattaagctacaacaa
cctgctgttgcattaacagatatgtcaaatctttttggaattttaaaattctataaatat
gctcgttctagaggcataaaaccaattattggttgtgatttatggttatctaatgatgaa
gatctagataatccttttagaatattgattttagtatgcaatgaagttggatatttaaat
ttatgtgaaattatcacaaaatcttatttgataaatcaaagaaataataggcctgagata
cgtaaagagtggttattttccaaaaaaggtttaatagtattatctggcggtataaatggt
gatgttggttatgcattaaaacgaggcaagattgatgttgctttatctttagcaagagaa
tggaatgaaatgtttccagaatcttattacttggagattcaaagagctgggtttgatgga
gaagaaaattatatacaagctgtcttatctattgctattgaaacaaatattccagttgtt
gcaacacatcctgtgcagtttcttaagaaagaacattttcaagctcatgaaattagagtt
tgtatttctgaaggtaaacatttaactgatattcataggaaacataatttcacaaaggaa
caatatctagttagttctgaagaaatgacaaggttatttgctgacataccttctgcttta
tctaatactattgaaatagcaaaacgttgcaatctagtactaaaaactgggcaagcaatg
ttaccaaagtttgatgttgatgaagaaatttctttaggagattacttaagaaagttatca
aataaagggttattaaataagattaataatctatatcctgattcagaagaattattcaaa
tcaaaatattatgaacgtttagagcaagaatgtaagattattatacagatgggatttgct
ggatattttcttattgttcaagattttattaattggggtaaaaataatggtgttcctgtt
gggccaggacgtggatcaggcgctggttcattagttgcttatgctcttggtataactgat
ttagatccaattaagtatgatcttctttttgaacgattcttaaatccagaacgcgtttca
atgcctgactttgatattgatttttgtcaagataatagagatcgtgttatagattatgta
aaaaataaatatggtaccgagtctgttagtcaaatagcaacttttggaacttttggtgct
aaggctgtaattcgtgatgttggtagagttttaggcttgccttactcattgtgtgattct
ttatccaaattagttccttttagtcctgtagaacaatggaccttagaaaaagtattgaat
tctgatcctgtttttaaatctcgctatgagcaggaagaagaagtaaagttattaatagac
ttagctaggcatttagaaggattagtgcgaaatattggtatgcatgctggtggagtttta
atagccccagggaaattaacagatttttgtcctctttattgccagccagggcaagaaaat
acattggtttctcagtttgataaagatgatgttgagctagctggtttagtgaaatttgat
tttttaggcttgagaaatttaacagttcttgattggactgtgcgttatattaagctttct
agcaaagagaatgagttttttgatctttcctctttatcattagaggatgaagaaacattt
aagttattgtgctctggcaatacaaccgcagtttttcagctagaatccaaaggcatgaag
gaattactaaaaaaattacaacctagtacttttgaagatattattgctgttttggcttta
tatcgtcctgggcctttagagtctggaatggtgaatgattttgtaaatcgtaaacatggt
ttgtcaaatataaattattttcatcctgtgttagaaagtattttaaaaagtacttatggg
gtaatagtttatcaggaacaagtaatgttaatttctcaagtaattggaggctattcttta
ggtagcgctgatttacttcgtagagcaatgggcaaaaaagatcctgatgaaatgtctaag
cacagagttttatttgaaaagggagctattagcaacggttatagctctcaattggctatt
aaattatttgatctgatggagaagtttgctggttatggttttaataagtcacactctgcc
gcttatgctttaatagcataccaaactgcatggttaaaagctcattattgtgcggaattt
tttgcttcagccatgtcttctgatatggatgacacagataaaatacaaattttattcaat
gatgctaagtataataatataaaaatattaccaccagatattaatttgtctaactttaga
tttgagcctgtaatttcggaagtaaatgatcgcaaatcacatgagattaggtatggattg
ggagctataaaagggacaggtaaaattgttatagaggagattgtaaaaataagaaatcaa
gatggtccttttaagagtatttttgatttttgtttcagagtttcaaaattagttaatcga
agaactatagaatcgctaataaaatctggttcttttgattccattgaattgaatagagct
tatttattgtcttctctagataaggttattgactcagttgagcagaaacaaagagatatt
tatcaaacttctttgtttggcaataatgaggaatcttgttttttaggttcttctgttgct
gatgaggttgcagtatcatggaatttgcataaaacgcttatagaagaaaaatctgccctc
ggttattgctttagtggacatctattttcttgttgggaagatgaaatcagaaaactattt
cctaaaaagctaattgatgtagatcataataataaaccacaatggatctgtggagtttta
gtgcgcatgcgtagtttatttactcgtcgtgggaaaattcttcttatcatgctagatgac
ggcagcaaacagcttgaagttgttgtttacaatgagctttatacagaaataaaaaattat
ttaaaagaagataatctattaatagttaagggcatggttagtaaagatgattattctggt
aatttaagaattatttctgaacagatacatgatttgcaatttataagacaaaccatggct
aagtgtttaagactgcatataaagaatagtaagttttctttatcttcccttaaagatata
ttgcaaaaatttaagaattattctgatgtaggatcttcatcagtgccattatttattctt
tataagaatgaagataaaaattttttctgtaaaattaaattagatgacaaatggaatatt
atcattactaatgagttaatattagagctgcaaaagcttatgcgtgataatggttcaata
gatataggttattga
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